Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1036 ATGGGGTGCACATTTTCAGGGTTGAATGCTTTATACGACGCCGTTAATGGGGGAGGTGATGTGTGGATCAATGAGAACCGATTCCGCATCGTCAGGCAGCTCGGGGAAGGTGGCTTCGCCTTCGTCTACTTGGTCAAGGAGGTGGTCACTGATTCCTCCTCCGCCTCTGCTGGCAGCGCTCTTGCTAAGAAGCTCAAAGACTCCTCTCATGTCTCTGATGATGGAACTTATGCTATGAAAAAGGTCCTTATTCAGAACAGTGAACAATTAGAGTTGGTGAGGGAGGAGATCCGTGTCTCGTCACTTTTCAGTCATCCAAATCTGCTCCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAGAAGGAGTTCTATTCTACCTCTGATGTACTTCAAATATTTTGGCAGCTTTGTGCAGGACTCAAGCATATGCACAGTTTAGATCCTCCTTATGCACATAATGATGTCAAACCTGGAAATGTTCTCATAACACATAGAAAAGGACAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGGCCTGCCAAGAGACAAATTCGCTCCCGATCAGAGGCACTACAGTTACAGGAATGGGCAGCTGAACATTGTTCTGCTCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGATATTTGGTCACTAGGATGCACATTGTATGCAATAATGTATGGCGTATCTCCATTTGAATATGCACTTGAAGAATCTGGAGGGAGCCTGCAATTGGCCATTGTAAATGCTCAGGTCAAATGGCCTGCTGGACCTAAGCCTCCATATCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCACAGGCTGCTATGCGGCCACAGATAAATGACATCATTATCCACGTTGATAAGTTGATTGCCAAGTTTTCTCCTTGA 1041 0.4563 MGCTFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVYLVKEVVTDSSSASAGSALAKKLKDSSHVSDDGTYAMKKVLIQNSEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFWQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPAKRQIRSRSEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALEESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVTWMLQPQAAMRPQINDIIIHVDKLIAKFSP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1036 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Glsi13g1036 346 ProSitePatterns Protein kinases ATP-binding region signature. 34 64 IPR017441 GO:0005524
Glsi13g1036 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1036 346 Pfam Protein kinase domain 70 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1036 346 CDD STKc_16 27 342 - -
Glsi13g1036 346 ProSiteProfiles Protein kinase domain profile. 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1036 346 Gene3D Transferase(Phosphotransferase) domain 1 16 345 - -
Glsi13g1036 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Glsi13g1036 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 6 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1036 Glsi-ChrGlsi13 28432978 28437465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1036 33 336 EF-hand Containing Proteins AT4G04710 25.484 6.89e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Glsi13g1036 Pkinase 8.3e-30 CL0016