Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1020 ATGGCCACTTTCTTCAAAGGCTGTTACCCACTTTTCCTTTGCTTCATTCTTTTCTCTTGCTCCCATGTATTGCTTGTCACTTGTACTGAGTTTCAAGTTGGGGGTAAGGATGGCTGGGATTTCCCCAGGTCAAAGAACGACAGTGATATGTACAATCAGTGGGCATCCAAAAACAGATTCACAGTTAATGATACTGTTTGTTTCAAGTACAGGAAAGACTCAGTTTTGGTGGTGACCGAAGAGGCATACAAAAAATGCAGATCCTCCCATCCCCTTTTCTTCTCTAACAATGGTGACACTGTCTTCCAATTTGACCGACCCGGCTTGTTCTTCTTCATTAGTGGAATTTATCTTCACTGTGACAGCGGACAGAAGATGATCATCAAGGTTCTGGAAATGGAGGCAGCAAAATCACCCCAATCTGCAAATGAGAATGCAGAAAAATCAGATAAAAAATGTGCTGCTGCTGCTGAAATGACACCTACAAGCAAAACGACATCAGCACTTTTTGTTCTGTCATTCCTAGTCCTGCTTTTTGCTTGA 543 0.4236 MATFFKGCYPLFLCFILFSCSHVLLVTCTEFQVGGKDGWDFPRSKNDSDMYNQWASKNRFTVNDTVCFKYRKDSVLVVTEEAYKKCRSSHPLFFSNNGDTVFQFDRPGLFFFISGIYLHCDSGQKMIIKVLEMEAAKSPQSANENAEKSDKKCAAAAEMTPTSKTTSALFVLSFLVLLFA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1020 180 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Glsi13g1020 180 CDD OsENODL1_like 29 131 IPR041846 -
Glsi13g1020 180 FunFam Early nodulin-like protein 1 28 135 - -
Glsi13g1020 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Glsi13g1020 180 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
Glsi13g1020 180 Gene3D - 28 136 IPR008972 -
Glsi13g1020 180 PANTHER BLUE COPPER PROTEIN 28 148 IPR039391 GO:0009055
Glsi13g1020 180 Pfam Plastocyanin-like domain 48 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1020 Glsi-ChrGlsi13 28311560 28312189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1020 11 134 Phytocyanin Superfamily AT1G48940 62.097 1.25e-56 174