Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1009 ATGATGAGGTGGCGCAAAGTATTGAATTCTGTTCAGCCACTTGCCGCCCGTTCCTTTCTCTTCTCCTTTACTCTTTTGCTCGTCCTGAAGCTCGATCATGTAGCCTCCTGCTCTTGGTGGATATTTTTTTCTCCACTTTGGGGGTTTCATGCTGTCGTGGCTATAGGAAGGTTCTCATTGCCTGCAACATCAATTTCATGTCCTCGACATTGGGTCCCGTGCCATGCCATTGTTGCAATACCATTGCTCATTGCATTTGAATTGCTCCTTTGTATATATCTCGAGAGTTTTGATGGGGATTTATTTAGGATAGTTCCCATAAACCTTAGTTACTTTTGGGTGGTGCTCAAGCGGTATGCAGAGCAATGGTTACATGAAATGTGTACGGCTTTAATGCCAGGGGACGAAGAAAACATGAGTGATGAGGCAATGTTGGAAAATCTTCCTTGGTCTAATCCAGTTATTCATAGAAATTCTTGCTCTATTGAAGCCAGTTCATCTTCTACAATGATCAGATATCCTGAGTAG 528 0.4299 MMRWRKVLNSVQPLAARSFLFSFTLLLVLKLDHVASCSWWIFFSPLWGFHAVVAIGRFSLPATSISCPRHWVPCHAIVAIPLLIAFELLLCIYLESFDGDLFRIVPINLSYFWVVLKRYAEQWLHEMCTALMPGDEENMSDEAMLENLPWSNPVIHRNSCSIEASSSSTMIRYPE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1009 175 Pfam Transmembrane Fragile-X-F protein 29 149 IPR019396 -
Glsi13g1009 175 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1009 Glsi-ChrGlsi13 28177990 28182986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1009 2 173 C3H Transcription Factor Family AT1G18470 45.374 3.79e-48 159