Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1001 ATGTGGGGAATAGAAATATATGTTGTTCATCTAACTTCCGCTCTGGCACTGTCATATGCCAAATCTTTCATGTTTTTATCCTCAGGATCAAGCATTAGATGCCTAACCTATAGTAGTTTGGTGGGTTGGAATAGAATTGAACAGCAACGGGGACAGATTGAAAATTGGCAGAAGTTGGGGCAGGGCTCACGCATTTGGTCCCAATATTCGGATAAGCAAATTGTTCCACACTCTCTCATGGCTCCTCCATGGGTTCAAGAGCTCCATCTTCGTCACTTGAGCATTCATGTCTCTGTTGATAACATGTTTTCAGTCACACCATCAAGGCCTATTGCCGCTAAACCAGGAGACACCCTATACCTTTCCAACCTCGACGACATGATTGGAGCTCGTGTGTTTACACCTACAGTGTACTTTTATCAATCAGACCACGACTTGGGTTTCTGCCCAAAAAATGTCATAAAAACACTGCGTGATGCTCTTGCTGATGTTTTGGTACCTTATTACCCTCTTTCAGGCAGACTCAGAGAGACCCAGAATGGGAAACTGGAAGTGTTTTTCGGACCAGATCAAGGGGTACTCATGGTGGAAGCACATTCTGAAACTGCATTATCTGAACTAGGAGACCTTACAGCCCCAAACCCAGATTGGGAGCCCTTGATCTTCAAGTTTCCCAGTGAAGAACCATACAAAGTCCTTGACATGCCACTGCTCATTGCTCAGGTTACCCTCTTCAGCTGTGGTGGCTTTAGCCTAGGCTTGAGGCTCTGCCATTGCATTTGCGATGGGCTTGGAGCTATGCAGTTTTTAGGTGCTTGGGCTGCCACAGCAAAAACAGGGACCCTGGTGATAGACTCTGAGCCATGTTGGGACAGGGAAATGTTTCAGCCTCGGAACCCACCTGTGGTGAAGTTCCCACATATGGAATTCATGAGAATTGACGAGGGCTCCAACCTGACTATGACACTATGGCAATCCAAGCCTGTTCAGAAGTGCTATAGGATCAGCCGTGAGTTTCAAACCTGGCTCAAAGCTCTTGCTCAACCCTATGATAATGCCGGGTGCACCACCTTTGATGCCATGGCTGCACATATTTGGAGATCATGGGTGCAAGCCCTTGATGTGAAACCACTAGATTACCAGCTTAGACTAACATTTTCAGTTAATGCAAGGCAGAAGCTTAGGAACCCACCATTGAAAGATGGGTTCTACGGCAATGTGGTCTGTGTGGCATGTGCAGCAAGCAGTGTGTCAGAGCTGGTCCATGGACAACTTTCAGAGACGACCCGTCTGGTTCGCGAAGCAAGACAAGGCGTCTCAGAGGAGTATTTGAGATCTACAGTAGATTATATTGATGTGGATAGGCCAAGACAACTTGAGTTTGGAGGTAAATTGACAATAACCCAATGGACAAGGTTCTCTATTTACAAATCTGCCGATTTTGGGTGGGGAAGGCCACTTTATGCTGGTCCTATAGATTTGACACCAACACCACAAGTTTGTGTACTTTTACCAGAAGGAGAGGGTGATTCTACTGGTTCCGTCATGGTGTGCATATGCTTACCCGAGTCTGCTGCTCAGAAGTTTACAAAAGCCTTGTTGCCAGATTCAGGGTCGACACAAACCTATTGCTTATTCAACTGA 1644 0.4629 MWGIEIYVVHLTSALALSYAKSFMFLSSGSSIRCLTYSSLVGWNRIEQQRGQIENWQKLGQGSRIWSQYSDKQIVPHSLMAPPWVQELHLRHLSIHVSVDNMFSVTPSRPIAAKPGDTLYLSNLDDMIGARVFTPTVYFYQSDHDLGFCPKNVIKTLRDALADVLVPYYPLSGRLRETQNGKLEVFFGPDQGVLMVEAHSETALSELGDLTAPNPDWEPLIFKFPSEEPYKVLDMPLLIAQVTLFSCGGFSLGLRLCHCICDGLGAMQFLGAWAATAKTGTLVIDSEPCWDREMFQPRNPPVVKFPHMEFMRIDEGSNLTMTLWQSKPVQKCYRISREFQTWLKALAQPYDNAGCTTFDAMAAHIWRSWVQALDVKPLDYQLRLTFSVNARQKLRNPPLKDGFYGNVVCVACAASSVSELVHGQLSETTRLVREARQGVSEEYLRSTVDYIDVDRPRQLEFGGKLTITQWTRFSIYKSADFGWGRPLYAGPIDLTPTPQVCVLLPEGEGDSTGSVMVCICLPESAAQKFTKALLPDSGSTQTYCLFN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1001 547 Gene3D - 318 533 IPR023213 -
Glsi13g1001 547 Gene3D - 92 312 IPR023213 -
Glsi13g1001 547 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 105 529 - -
Glsi13g1001 547 Pfam Transferase family 98 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1001 Glsi-ChrGlsi13 28135960 28139373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1001 101 534 Monolignol Biosynthesis Gene Families AT5G48930 30.649 4.88e-54 187