Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0985 ATGTGGAAACACTTCTTCGTGTCTTGTAGTGAACTAGAATACCTCCCAAGCGCTCCATTTTTCTCTTGTGCTGAGAGCTTTGTGCCTGATCATGTCTTCGCGCATTGTGTTGTCGCAGCAGCTAGTGCTTTAGAGTGGGTGCAAATGAAGGACCCGGAAGAAGATCAAGTTATGTCTAGGAAGCCTCTACATAAATCCACCGACCGAAGAAGAAGGGGTAGGAGACGAAGCCAATGCAAACCAGAGATATTACAAGAAAAAGGGGTTGATATAGAACTGGGTTCCTCTGCTTCTTGCAAAAGCCTATCGTTCCACAGCAGGCCTGGCTATGGCCAGCTTGGGACCAAGTGTCTTGTCAAAGCTAACCACTTTCTTGCGGATATATCAGCATCAGACTTGAGCCATTACAGTGTTAAAATAATACCTGAAGTTACTTCTCGTAAAATAAGCAAAGCAATCATAGCCGAGTTGGTGAGGCTTCACAGGAACACAGACTTAGGGACGAGGCTCCCAGTTTATGATGGAGGAAGGAATCTTTACACTGCTGGTTTGCTTCCATTTACATACAAAGAGTTCAGCATAATATTGAGCGAAGATGATGAGGGGACTGGTAATACCAGGGAAAGAGAATTTATAGTGAGAATCAAGTTTGCAGCTCGTGTTAGCATGCATCAGTTACGTGAGCTTCTTTGTGGCAAACAAGTAGACACCCCACAAGAAGCACTTAATATTATTGATATTGTATTAAGGGAGCTTGCGGCCCAGAGTTACGTATCAGTTGGAAGGTTTCTTTATTCTGCTGACATTAAAAAACCACAGCAGCTAGGTGGTGGCCTGGAATCATGGCGTGGCTTCTACCAGAGCATAAGGCCTACACAGATGGGGTTGTCACTTAATATTGACATGTCATCAATGGCGTTTATTGAACCACTCCCTGTCATTGATTTTGTGGCTCAAATTCTGGGTAAAGACGTACATTCAAAACCATTGTCTGATGCAGATCGTGTCAAGATAAAAAAAGCCCTAAGAGGTGTAAAAATTGAAGTTACACACAGAGGAAATGTTCGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCTACAAGGGAACTTATATTCCCTCTAGATGAGCACATGAACATGAAATCAGTAGTTGATTATTTTCGAGAGATGTATGGCTATACAATTAAGTATGCTCATCTACCGTGCCTGCAAGTAGGAAACCAAAAGAAGGTGAACTATTTGCCCATGGAGGCGTGCAAGATAGTTGGGGGGCAGAGATATACAAAAGGGCTAAATGAAAAGCAGATAACTTCTCTGCTAAAGGTTTCATGCCAAAGACCCCGCGTACAAGAGCAAGACATTCTACAGACAATTCAACAAAACGATTATGAGCATAATCCCTATGCAAAGGAGTTTGGTATCAGCATAGACGACAAGCTTGCATCAGTTGAAGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCACGATACTGGAAGAGAGAAAGAATACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTTATAAATGGAAGCACTGTAAGATATTGGGCATGTATCAATTTCTCACGAAGTGTTCAAGAAAGCACAGCTCGTGGATTTTGCCAACATTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGATCCAGTGATTCCTATATATTCAGCAAGACCAGATCAGGTAAAAAAGGCCTTGAAGTATGTACAATGTGCTGCTTTAGGGAAACTTGGTGGAAAAGAGCTAGAGTTGCTAATTGCCATTCTTCCAGACAATAATGGCTCTCTCTATGGTGATCTCAAAAGATTATGTGAAACAGATCTGGGGTTGATTTCTCAGTGCTGCCTCACAAAACACGTCTACAAGGTTAATAGACAGTACCTGGCAAATGTGGCACTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCGTTAAGTTGGAGGATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCGGAATCTGGGGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCCTCCCAGGACTGGCCCGAAGTAACAAAATATGCAGGACTAGTATGTGCACAGCCTCATCGTGAAGAACTCATCCAAGACCTCTTCAAATGTTGGAAAGATCCTCAGCGTGGTGTAGTTTATGGTGGAATGATCAGAGAGCTCTTACTCTCATTCAAGAAAGCAACCGGACAAAAACCATTGAGGATAATATTTTACAGAGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTGTATGAGCTTGATGCCATCCGAAAGGCTTGTGCATCTCTGGAACCTAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAGCGGCATCACACTAGACTCTTCTCAAACAACCATGATGACAGAAACAGCACTGATAGGAGTGGCAACATCTTACCAGGTACCGTGGTGGATTCTAAGATCTGTCATCCTACTGAATTCGACTTCTATTTATGCAGTCATGCAGGAATCCAGGGGACAAGTAGACCAGCTCACTATCATGTCCTGTGGGACGAGAACAAATTCACTGCAGATGAGATTCAATCTCTTACCAACAACTTATGCTACACGTATGCAAGATGTACAAGATCTGTTTCCGTAGTGCCTCCAGCATACTATGCTCATCTGGCAGCCTACAGAGCTCGATTCTACATGGAACCTGATGTGGCTGAGAATGGCAAAGCGCGAGGTGCAAGATCAAAAGATGGGTCAGTTCGGCCATTGCCGGCTCTGAAAGACAAGGTGAAGAATGTCATGTTTTACTGTTGA 2871 0.4319 MWKHFFVSCSELEYLPSAPFFSCAESFVPDHVFAHCVVAAASALEWVQMKDPEEDQVMSRKPLHKSTDRRRRGRRRSQCKPEILQEKGVDIELGSSASCKSLSFHSRPGYGQLGTKCLVKANHFLADISASDLSHYSVKIIPEVTSRKISKAIIAELVRLHRNTDLGTRLPVYDGGRNLYTAGLLPFTYKEFSIILSEDDEGTGNTREREFIVRIKFAARVSMHQLRELLCGKQVDTPQEALNIIDIVLRELAAQSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKIEVTHRGNVRRKYRISGLTSQPTRELIFPLDEHMNMKSVVDYFREMYGYTIKYAHLPCLQVGNQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPRVQEQDILQTIQQNDYEHNPYAKEFGISIDDKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQHLVQMCQISGMEFSQDPVIPIYSARPDQVKKALKYVQCAALGKLGGKELELLIAILPDNNGSLYGDLKRLCETDLGLISQCCLTKHVYKVNRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVAENGKARGARSKDGSVRPLPALKDKVKNVMFYC 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0985 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 100 921 - -
Glsi13g0985 956 Pfam Argonaute linker 1 domain 259 308 IPR014811 -
Glsi13g0985 956 Gene3D paz domain 305 429 - -
Glsi13g0985 956 FunFam Protein argonaute-2 304 430 - -
Glsi13g0985 956 CDD PAZ_argonaute_like 310 424 - -
Glsi13g0985 956 SUPERFAMILY PAZ domain 306 465 IPR036085 GO:0005515
Glsi13g0985 956 ProSiteProfiles PAZ domain profile. 311 425 IPR003100 GO:0005515
Glsi13g0985 956 Pfam N-terminal domain of argonaute 116 249 IPR032474 -
Glsi13g0985 956 Gene3D - 489 662 - -
Glsi13g0985 956 SUPERFAMILY Ribonuclease H-like 589 921 IPR012337 -
Glsi13g0985 956 Pfam Piwi domain 600 919 IPR003165 GO:0003676
Glsi13g0985 956 Pfam Mid domain of argonaute 508 584 IPR032473 -
Glsi13g0985 956 FunFam protein argonaute 10-like 668 956 - -
Glsi13g0985 956 SMART DUF1785_2 258 310 IPR014811 -
Glsi13g0985 956 Pfam PAZ domain 315 441 IPR003100 GO:0005515
Glsi13g0985 956 CDD Piwi_ago-like 469 919 IPR045246 -
Glsi13g0985 956 Gene3D - 668 956 IPR036397 GO:0003676
Glsi13g0985 956 MobiDBLite consensus disorder prediction 55 78 - -
Glsi13g0985 956 ProSiteProfiles Piwi domain profile. 599 920 IPR003165 GO:0003676
Glsi13g0985 956 SMART PAZ_2_a_3 315 447 IPR003100 GO:0005515
Glsi13g0985 956 SMART Piwi_a_2 599 920 IPR003165 GO:0003676
Glsi13g0985 956 Pfam Argonaute linker 2 domain 454 497 IPR032472 -
Glsi13g0985 956 FunFam Argonaute 10 489 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0985 Glsi-ChrGlsi13 28003678 28010213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0985 100 956 Eukaryotic Initiation Factors Gene Family AT5G43810 75.376 0.0 1404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0985 13 28003678 28010213 Glsi13g0985 13 28003678 28010213 ECH