Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0974 ATGGAGGAGCTCTTGTCCTGGATTAAGCTTCTTGCTTTCTCTTTCGTGGCTCTACTATTTGTGCTCAAGGTTGCAGTGTTGATCTGGTGGAGGCCTAGGAAAATTGAAGGCCATTTCTCCAAGCAAGGGATCAAAGGACCCCCTTACCGTTTTTTCATTGGAAATGTCAAAGAACTTGTGGCCATGATGTTGAAGGCTTCCTCTCAGCCCATGCCTTTCTCTCACAACATTCTTCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATCTACGGTGCAACATTCCTGGTTTGGTTTGGACCCAGTGTTCGTCTCATTGTGTCTGATCCGGACCTCATCAGGGAAATCTTCTCGTCCAAGTCAGAATTGTATGAGAAAAATGAAGCCCCCCCTCTTGTCAAACAGCTAGAAGGCGATGGCCTCCTCAGCCTCAAAGGAGAGAAATGGGCTCACCACAGAAAGATCATTTCCCCGACCTTTCACATGGAAAACCTCAAATTGTTGATACCCGTGATGACAACAAGCGTTGTTGACATGTTGGAGAAGTGGTCGGCAATGTCGTCGGAGAGTAGTGGCGAAGTGGAAGTTGAAGTTTCGGAGTGGTATCAAACCTTAACAGAAGATGTCATTACCAGGACGGCATTTGGAAGCAGCTACGAAGATGGCAAAGCCATTTTCAGACTCCAAGCTCAACAAATGCTCTTAGCTGCTGATGCCTTCCAAAAAGTTTTCATCCCAGGTTACAGATTCTTTCCGACGAGGAGGAATATAAATTCTTGGAAATTGGACAAGGAAATAAAGAGATCGCTGGTGAAACTGATAGATAAGAGGAAAGAGAATTCGGGCGAGGAGAAAGGGGCAAGGGATTTGCTGGGGCTAATGATAAAGGCGTCGGATTCCAGTTGGTCAAATGTGACGGTGGATGACATGGTGGAAGAGTGCAAGAGCTTTTTCTTTGCGGGCAAACACACCACATCCAACCTGCTGACGTGGACGACCATTCTGCTGGCAATGCACCCACAATGGCAGGTGAAGGCACGTGAGGAGGTGCTGAGGGTGTGTGGAGCACGTGACCTACCCTCCAAAGATGATGTTGTTAAGCTGAAGACGCTGAGTATGATTGTCAATGAATCTCTAAGACTCTATCCCCCAACGATCGCAACAATCAGACGGGCAAAAATGGATGTGGAATTAGGTGGCTACAAGATCCCACGTGGGACGGAGCTCTTGATTCCGATCCTGGCCGTTCATCACGATCAGGCCATATGGGGCAACGATGTCAATGAATTCAATCCTAGCCGTTTCTCAGACGGGGTGGCCCGCGCCGCAAAGCATCCAGTGGCATTCATACCGTTTGGGCTTGGTGCGCGCACGTGCATCGGACAAAATCTTGCAGTTCTACAAACCAAGCTAGCTCTATCAATCGTACTACAGCGTTTTAGTTTCAGGTTGGCCCCAAACTATCAACACGCTCCAACGGTCCTAATGCTACTCTATCCTCAGTATGGTGCGCCTATCATTCTCCAACGCATATCCACACCCGATCAAGGGCCCTGA 1560 0.4833 MEELLSWIKLLAFSFVALLFVLKVAVLIWWRPRKIEGHFSKQGIKGPPYRFFIGNVKELVAMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPSVRLIVSDPDLIREIFSSKSELYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMTTSVVDMLEKWSAMSSESSGEVEVEVSEWYQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMLLAADAFQKVFIPGYRFFPTRRNINSWKLDKEIKRSLVKLIDKRKENSGEEKGARDLLGLMIKASDSSWSNVTVDDMVEECKSFFFAGKHTTSNLLTWTTILLAMHPQWQVKAREEVLRVCGARDLPSKDDVVKLKTLSMIVNESLRLYPPTIATIRRAKMDVELGGYKIPRGTELLIPILAVHHDQAIWGNDVNEFNPSRFSDGVARAAKHPVAFIPFGLGARTCIGQNLAVLQTKLALSIVLQRFSFRLAPNYQHAPTVLMLLYPQYGAPIILQRISTPDQGP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0974 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Glsi13g0974 519 CDD CYP734 82 506 - -
Glsi13g0974 519 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 505 - -
Glsi13g0974 519 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 SUPERFAMILY Cytochrome P450 46 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0974 519 FunFam Cytochrome P450 734A1 29 513 - -
Glsi13g0974 519 Pfam Cytochrome P450 82 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0974 Glsi-ChrGlsi13 27923073 27927112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0974 2 514 Cytochrome P450 AT2G26710 76.820 0.0 830
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0974 13 27923073 27927112 Glsi02g1059 02 7103992 7106889 CCT