Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0971 ATGGGCAGCTCGGAGAACGCCGCCGTTGCCGGCCGCATTCCTGCGGTGGATAAGGGCGTAGATTATGCGAACTACTTTTGCACCTATGCTTTTCTGTACCACCAGAAGGATATGCTTTCCGATCGGGTTCGCATGGATGCTTACTTCAACGCCATTTTTGAGAACAAGCATCACTTCAATGGAAAAACTGTTTTAGATGTGGGAACAGGAAGTGGCATTCTCGCTATTTGGTCAGCCCAGGCTGGTGCAAGGAAAGTATATGCAGTGGAAGCAACTAAGATGTCAGAACATGCTCGTGCTCTTGTCAAAGCAAATAATCTCCAACATGTAGTTGAAGTCATTGAGGGCTCAATGGAGGAAATAACTTTGCCAGAGAAAGTTGACGTGATCATCTCTGAGTGGATGGGATATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGAGTGATGTATCCCAGTCATGCTCGAATATGGATTGCACCTATCAGGACTGGGTTAGTAGATCACAGAATGGGTGAATACCATTCAGCTATGGATGATTGGCGCAATTTTGTTGATGAAACAAAAGGCTCTTATGGTGTTGATATGAATATTCTAACAAAGCCTTTTTCTGAGGAGCAGAGAAAATACTACCTACAGACATCAATGTGGAACAATCTTCAACCACATCAAGTCATAGGGACAGCTGCTATAATAAAGGAGATTGATTGTTTAACTGCTACTGTGGCTGATATAAAGGAAGTCAGATCAAAATTTTCTTTGTCAATAACCATGGAGAACACAATGCTGTGTGGGTTTGGAGGGTGGTTTGATGTTCATTTTCGGGGAAGAAGTGAAGATCCAGCTGAACAGGAGATAGAGTTAACCACAGCTCCTAGTATAGATTACAACACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCTGCTCATGTCGGTGAAGGTGATAATTTAAACGTTTCTTTCTTCATGGATCGCTCAAAGGAAAACCATCGTCTGATGGAGGTTGAGTTTGAGTTTGAGATTCGACAGCATTCTGGCAAGCTTCTTGCGCCTTTCAAAAATAACATTATTCAAGATGGGACTGTATGCTTATCACTAGGGGGTTGA 1149 0.4326 MGSSENAAVAGRIPAVDKGVDYANYFCTYAFLYHQKDMLSDRVRMDAYFNAIFENKHHFNGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQHVVEVIEGSMEEITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARIWIAPIRTGLVDHRMGEYHSAMDDWRNFVDETKGSYGVDMNILTKPFSEEQRKYYLQTSMWNNLQPHQVIGTAAIIKEIDCLTATVADIKEVRSKFSLSITMENTMLCGFGGWFDVHFRGRSEDPAEQEIELTTAPSIDYNTHWGQQVFLLHPPAHVGEGDNLNVSFFMDRSKENHRLMEVEFEFEIRQHSGKLLAPFKNNIIQDGTVCLSLGG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0971 382 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Glsi13g0971 382 FunFam Protein arginine N-methyltransferase PRMT10 166 372 - -
Glsi13g0971 382 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Glsi13g0971 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Glsi13g0971 382 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Glsi13g0971 382 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Glsi13g0971 382 Gene3D - 166 371 - -
Glsi13g0971 382 CDD AdoMet_MTases 63 163 - -
Glsi13g0971 382 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 358 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0971 Glsi-ChrGlsi13 27905962 27910220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0971 24 332 C2H2 Transcription Factor Family AT3G12270 33.233 3.48e-41 151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0971 13 27905962 27910220 Glsi13g0971 13 27905962 27910220 ECH