Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0960 ATGGCGACTTTCTTCCGGAGGCTGGCAAGAGCCACTCCTATTGCATACACAAATGCCTTCGGTGGCCATTCCAGCTCCAGTCACAGTAATTTCCGGGTGCCATTTGGTGCAATTGCTGCGATTTCCGGTGGACTCTCCTACTTATACTACTTTTCCTCACCCAACCTGGTTCATTTGGAACAGATAAAAGAAGAGCAAAGTCAAAATAATGCACTTGTTCCAGATAAATGGATCGAATTTAAGTTGCAAGACACTGCCAGGGTTAGTCACAATTCTCAGTTATTCAGGTTTTCATTTGATCCCACTAAGAAGTTGGGTTTGGATGTTGCTTCTTGCATTCTTACAAGGGCTCCACTGGGACTAGATGCTGAAGGAAAACCAAAATATGTCGTTCGTCCGTATACTCCTATATCGGATCCAGAATCTAAGGGATACTTTGATTTGTTAATCAAGGTGTACCCTGAAGGAAAAATGAGTCAGCATTTTGCAAGCTTAAAACCAGGCGATGTAGTTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACTCCCAACATGAAGAAGCATATTGGCATGATTGCTGGTGGCACAGGAATTACTCCAATGCTTCAGGTAATTGAGGCTATATTGAAGAATCCTGATGACAAAACTCAGATCTCGTTGCTTTATGCTAATGTCTCGCCAGATGACATCCTGCTGAAACAGAAGCTTGACATTCTAGCAGGTAGCCATCCAAACTTAAAGATATTCTACACTGTAGATAATCCAACAAAGAATTGGAGAGGTGGTGCAGGTTACATATCAAAGGATATGGCTGAGAAAGGCTTACCTGGTCCTAGTGATGATACTCTTATCCTTGTTTGTGGACCCCCGGGGATGATGAAACATATATCTGGTGAAAAGGCTAAAGACTGGACACAAGGAGAGCTTACTGGCATACTCAAAGAGCTTGGATTCACAGAGCAAATGGTTTACAAATTTTGA 984 0.4248 MATFFRRLARATPIAYTNAFGGHSSSSHSNFRVPFGAIAAISGGLSYLYYFSSPNLVHLEQIKEEQSQNNALVPDKWIEFKLQDTARVSHNSQLFRFSFDPTKKLGLDVASCILTRAPLGLDAEGKPKYVVRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDKTQISLLYANVSPDDILLKQKLDILAGSHPNLKIFYTVDNPTKNWRGGAGYISKDMAEKGLPGPSDDTLILVCGPPGMMKHISGEKAKDWTQGELTGILKELGFTEQMVYKF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0960 327 Pfam Oxidoreductase NAD-binding domain 192 298 IPR001433 GO:0016491
Glsi13g0960 327 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 75 183 IPR017927 GO:0016491
Glsi13g0960 327 Pfam Oxidoreductase FAD-binding domain 80 182 IPR008333 -
Glsi13g0960 327 FunFam NADH-cytochrome b5 reductase 174 327 - -
Glsi13g0960 327 SUPERFAMILY Riboflavin synthase domain-like 68 185 IPR017938 -
Glsi13g0960 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 132 139 IPR001709 GO:0016491
Glsi13g0960 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 191 210 IPR001709 GO:0016491
Glsi13g0960 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 284 292 IPR001709 GO:0016491
Glsi13g0960 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 229 240 IPR001709 GO:0016491
Glsi13g0960 327 FunFam NADH-cytochrome b5 reductase 70 173 - -
Glsi13g0960 327 PANTHER NADH-CYTOCHROME B5 REDUCTASE 58 327 IPR001834 GO:0016491
Glsi13g0960 327 CDD cyt_b5_reduct_like 80 327 - -
Glsi13g0960 327 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 170 320 IPR039261 -
Glsi13g0960 327 Gene3D - 174 327 IPR039261 -
Glsi13g0960 327 Coils Coil 326 327 - -
Glsi13g0960 327 PRINTS Cytochrome B5 reductase signature 168 182 - -
Glsi13g0960 327 PRINTS Cytochrome B5 reductase signature 284 292 - -
Glsi13g0960 327 PRINTS Cytochrome B5 reductase signature 229 240 - -
Glsi13g0960 327 PRINTS Cytochrome B5 reductase signature 132 139 - -
Glsi13g0960 327 PRINTS Cytochrome B5 reductase signature 191 210 - -
Glsi13g0960 327 Gene3D Translation factors 69 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0960 Glsi-ChrGlsi13 27845900 27852152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0960 71 327 NADPH P450 reductases AT5G17770 41.313 5.55e-63 199