Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0955 ATGGATGGGAACAAAGACGATGCCTTGAAATGCTTGAAACTTGGGAAAGAGGCATTAGAAGCTGGGGATCGGACCCGTGCTTTGAAGTTCGTGACCAAAGCTCGCCGTCTTGACCCGACGTTGCCGGTGGATGATTTATTGTCGGCGATAGACAAGGATACAGGTGAGCAACCCGCTGCAGCCACCGCCAATGGACCATCTGGTGCGTCTCCTTCCGAAAAAACTTCTATCCGCCAAAGGGGTTCCTCTACCGGGTCTACGTCATCTTCGTCTTCAGCTATGTATACGGAGGAGCAAACTACAATAGTGAGAGAGATTAGAAGGAAGAAGAATTATTATGAGATTTTGGGACTAGAGAAGAATTGCACGGTCGAGGATGTACGAAAAGCTTATAGAAAATTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCGCCCGGTGCTGAGGAAGCATTTAAGCTTGTTTCCAAGGCATTTCAGTGTCTCAGTAATGAAGAGAGTCGGAAAAAGTATGATCTTGCTGGAGAAGATGAACCCATTTACGAGAGACGTGCAACGAGGCAGGGGGCAAGAACGTATCATCATGGATATTTTGATTCCGACATTGACGCAGAGGAAATCTTCAGGAATTTCTTCTTTGGTGGGAGTGGGATGGCTCCTGCAACTCCTTTTGGTAGCTTTAGTTTTGGACCAGGGGTGAATCCCAGGCCGGCTGAACATGGCTCTGCTGGCTTTAACGTTCGTGCTCTAATTCAGTTGCTTCCGGTTCTGCTGATTTTGCTTATGAACTTTTTTCCATCTTCAGATCAAAATTATATGATTTCTCAGTCCTATCCATATGTACACCGGTTTACAACGCCAAAGGGTGTCAATTATTATGTCAAGTCGTCCAATTTTGCTAAAGATTACCCGCTAAACAGCCCTGAACGCACAAAGATTGAAGAAAGGGCTGAGAGGGAATACAGCAGCATTCTTGCACAGAGCTGTCGGCTTGAGTTACAGCGAAGACAATGGGGATATATTCGGGAAACACCGCACTGTGATATGCTTCGGAAGTTTGATCCAGTGCAGTGA 1074 0.46 MDGNKDDALKCLKLGKEALEAGDRTRALKFVTKARRLDPTLPVDDLLSAIDKDTGEQPAAATANGPSGASPSEKTSIRQRGSSTGSTSSSSSAMYTEEQTTIVREIRRKKNYYEILGLEKNCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKLVSKAFQCLSNEESRKKYDLAGEDEPIYERRATRQGARTYHHGYFDSDIDAEEIFRNFFFGGSGMAPATPFGSFSFGPGVNPRPAEHGSAGFNVRALIQLLPVLLILLMNFFPSSDQNYMISQSYPYVHRFTTPKGVNYYVKSSNFAKDYPLNSPERTKIEERAEREYSSILAQSCRLELQRRQWGYIRETPHCDMLRKFDPVQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0955 357 CDD DnaJ 111 164 IPR001623 -
Glsi13g0955 357 MobiDBLite consensus disorder prediction 60 99 - -
Glsi13g0955 357 Pfam Domain of unknown function (DUF1977) 268 337 IPR015399 -
Glsi13g0955 357 MobiDBLite consensus disorder prediction 54 99 - -
Glsi13g0955 357 ProSiteProfiles dnaJ domain profile. 111 175 IPR001623 -
Glsi13g0955 357 PANTHER AT29763P-RELATED 1 352 - -
Glsi13g0955 357 Pfam DnaJ domain 111 172 IPR001623 -
Glsi13g0955 357 SUPERFAMILY Chaperone J-domain 108 217 IPR036869 -
Glsi13g0955 357 PRINTS DnaJ domain signature 147 167 IPR001623 -
Glsi13g0955 357 PRINTS DnaJ domain signature 113 131 IPR001623 -
Glsi13g0955 357 PRINTS DnaJ domain signature 131 146 IPR001623 -
Glsi13g0955 357 SMART dnaj_3 110 167 IPR001623 -
Glsi13g0955 357 Gene3D DnaJ domain 107 221 IPR036869 -
Glsi13g0955 357 ProSitePatterns Nt-dnaJ domain signature. 152 171 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0955 Glsi-ChrGlsi13 27817348 27818421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0955 106 172 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 3.01e-09 56.2