Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0940 ATGGTTGAACAGGTGCTACTTTGGATTTTGGAAAAAGCTTATGTTCCTAGTACACTGTTGATAATCTTCATATGTTTGAAAATGCTTAACTTTTTCTTAGAATGGGGAGATTCAGTCCCTAATCATGTTCAGCAGGGAAAGCCTTCTGAAAATGAATCTAGGCACTACTTTCAACAACTTGTAGATGCTGCTGCTCATTGTCACAGCAAGGGTGTGTTCCATAGAGACTTAAAGCCTGAAATTCTTCTGCTTGATGATTATGGAAATTTGAAGGTTTCTGACTTTGGACTGAGTGCATGGAATAAGTTCTCTTTTATCAATGCCTTCACTCATATATCTCCCTTCTCTTTCTCTATGTCTCGCTCTCTTCAGGGTGTTGGCTTTCTTCCCACCACAAGTGGAACCCCAAATTTTGTTGCCTCTGAGCGTAATCAAATTGAAGAAATAAGAAAAGATCCTTGTTTTAGGAGAAACTATGTTCCTGTAAAACTCAAGGAAAATAAGGAAGTGAATTTGGATGATGTTTGGGCCGTTTTTGATGAAATTGAGGATTATGTAAAGCGGCAAACTCGTTTTGTTTCCCGTAAACCAGCTAAGGTTATAATTTCCTCTATTGAAGCTGATGCAGAGTCAATGGGTCTTAAGGTTCATTCTCGTAACTACAAGATTAGGCTTGAAGGAGTATCTGCAAATAATGCTGGACAATTTGCAGTGGTCTTGGAGGTAACTTGTTTTTGCATTTTGTTGGTTTTGTTACTGGCAGTATGGAGACCTGAATTTCGTATATATGAAATAATCTTCTCATTATGTGAAAAGGTCTTTGAAGTTGCACCGTCCCTTTTCCTGATAGATGTTCGGAAGGCTGCAGGGGGATACTCTTGA 882 0.3878 MVEQVLLWILEKAYVPSTLLIIFICLKMLNFFLEWGDSVPNHVQQGKPSENESRHYFQQLVDAAAHCHSKGVFHRDLKPEILLLDDYGNLKVSDFGLSAWNKFSFINAFTHISPFSFSMSRSLQGVGFLPTTSGTPNFVASERNQIEEIRKDPCFRRNYVPVKLKENKEVNLDDVWAVFDEIEDYVKRQTRFVSRKPAKVIISSIEADAESMGLKVHSRNYKIRLEGVSANNAGQFAVVLEVTCFCILLVLLLAVWRPEFRIYEIIFSLCEKVFEVAPSLFLIDVRKAAGGYS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0940 293 Gene3D Kinase associated domain 1, KA1 174 293 - -
Glsi13g0940 293 Pfam NAF domain 187 217 IPR004041 GO:0007165
Glsi13g0940 293 SMART serkin_6 8 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0940 293 Gene3D Transferase(Phosphotransferase) domain 1 22 173 - -
Glsi13g0940 293 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 41 142 - -
Glsi13g0940 293 SUPERFAMILY Protein kinase-like (PK-like) 44 142 IPR011009 -
Glsi13g0940 293 ProSiteProfiles Protein kinase domain profile. 1 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0940 293 Pfam Protein kinase domain 38 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0940 293 CDD CIPK_C 181 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0940 Glsi-ChrGlsi13 27673002 27677948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0940 22 223 CBL-interacting serine-threonine protein kinases AT5G35410 37.543 1.34e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi13g0940 Pkinase 3.1e-15 CL0016