Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0937 ATGTCGAGCTGCAGCATCGATGTTGTGCCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCCTATTTGACATCGTGACCGTTAGATGTGGGCACTGCACAAATCTATGGTCTGTGAACATGGCGGCGACGTTTCAGTCACTTTCATGGCAAGATGTTCAGGCACCTGGATACTCAAATCAAGACTACAGAATCGACACAGGTTCCTCTTCCAAATGCAACAATAATAGGAACATTGCAATGCGAGCACCCACCACCCAAGTAACTGAGCAAAGGGCTGTGAACCGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACGGCTGCAAAAAACTGGGCACACTTCCCTCATATACATTTTGGGCTGATGTTAGAGACCAACAATCAAGCTAAGATGGAGAATGGTTCTGAGAAGCATTTAATGTCAAGGGCGGCACTTTTGAAAAAATAA 567 0.4603 MSSCSIDVVPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAATFQSLSWQDVQAPGYSNQDYRIDTGSSSKCNNNRNIAMRAPTTQVTEQRAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKMENGSEKHLMSRAALLKK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0937 188 CDD HMG-box_SF 115 151 - -
Glsi13g0937 188 PANTHER PROTEIN YABBY 6-RELATED 1 171 IPR006780 GO:0007275
Glsi13g0937 188 Gene3D High mobility group box domain 98 177 IPR036910 -
Glsi13g0937 188 Pfam YABBY protein 10 161 IPR006780 GO:0007275
Glsi13g0937 188 FunFam Axial regulator YABBY 106 177 - -
Glsi13g0937 188 SUPERFAMILY HMG-box 106 154 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0937 Glsi-ChrGlsi13 27645553 27648620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0937 11 171 C2C2-YABBY Transcription Factor Family AT2G26580 77.640 1.19e-88 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Glsi13g0937 YABBY 2.7e-70 CL0114