Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0933 ATGGCTGGAAGAATGATGATGAGATTGGCTCTTCTGGCATTGTCAGTGTGTGCTTTCTTGCAAATTACAGCTGCACAGAAAGTGCTGACTGTTGGAAGTGACTTAGGATGGACCATTCCCCCTGCGGGCATCATAGCTTATGACACTTGGGTCATTTTGCAGACCTTTGAAGTTGGAGACATCCTCGTGTTCAAGTTCACAAATGGAGAACAAGATGTAGCACAAGTAACAAAGGAAGCATTCTTGAAATGCAATACAACAAACCCAATTGCCATTAAGAAAACCAACCCTGCAAATTTCACCTTGGATGCTGTGGGCGATTACTATTTCACAAGCACCTTGGAGAGGCACTGCATTCTTGGTCAAAAGCTAGCCATCCATGTCTCTGCTTCTGGACCTGGACCTTCACCCAGTCTTATTCCCAAACTCAAAATCAAACCCAGACCCACAGGGCCAGTTAACTACACCGTTGGTGACGGCTTGGGATGGATTGTTCCCCCTGGTGGTGAATTTGCATATGCTGCTTGGGCTCACAAAAAGATTTTCCTAATCGGAGACTCTCTTGTTTTCTTGTTCATAAACGGAACACAAGATGTTGCTGAGGTAAGCAAGGAAGCTTATGAGAAGTGCGAAACAAACAAAACTATAGCTGTTTATTCAACTAGCCCCACGATAATCATCCTAAACACCACTGGGGAGCACTTCTACACGAGCACTTACCCGAAATACTGTGCCTTGGGGCAGAAGCTAGCCATTAATGTCACTGCCAATAGCTCTTCTGGCACTGCCCTTTCCCCAGAAGGTGCCTTGTCTCCCTCTGCCCTCGGACCTTCGGCTCTCGATACAGCTAACTCTGCCTCATCTAAGGTTGTCGGTGGATACATGGCCACCTTCTTCTTCATTGGCATGGCTTTCTTCTATTGA 924 0.4643 MAGRMMMRLALLALSVCAFLQITAAQKVLTVGSDLGWTIPPAGIIAYDTWVILQTFEVGDILVFKFTNGEQDVAQVTKEAFLKCNTTNPIAIKKTNPANFTLDAVGDYYFTSTLERHCILGQKLAIHVSASGPGPSPSLIPKLKIKPRPTGPVNYTVGDGLGWIVPPGGEFAYAAWAHKKIFLIGDSLVFLFINGTQDVAEVSKEAYEKCETNKTIAVYSTSPTIIILNTTGEHFYTSTYPKYCALGQKLAINVTANSSSGTALSPEGALSPSALGPSALDTANSASSKVVGGYMATFFFIGMAFFY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0933 307 ProSiteProfiles Phytocyanin domain profile. 153 256 IPR003245 GO:0009055
Glsi13g0933 307 PANTHER BLUE COPPER PROTEIN 28 130 IPR039391 GO:0009055
Glsi13g0933 307 Gene3D - 153 266 IPR008972 -
Glsi13g0933 307 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Glsi13g0933 307 FunFam Cupredoxin superfamily protein 152 260 - -
Glsi13g0933 307 Pfam Plastocyanin-like domain 171 248 IPR003245 GO:0009055
Glsi13g0933 307 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
Glsi13g0933 307 Gene3D - 26 132 IPR008972 -
Glsi13g0933 307 SUPERFAMILY Cupredoxins 28 128 IPR008972 -
Glsi13g0933 307 FunFam Cupredoxin superfamily protein 26 133 - -
Glsi13g0933 307 SUPERFAMILY Cupredoxins 153 254 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0933 Glsi-ChrGlsi13 27620506 27621702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0933 156 307 Phytocyanin Superfamily AT4G31840 35.256 2.36e-19 82.0