LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi13g0931	ATGGCCAAGCACATTGGTTTGATAGGTTGCTCCCTCGTTGTAATGGCTTTATTATTTGGTGCAGCTGAAGCAAGAGATTATATGGTTGGTGACAGCTTTGGTTGGAAAATCCCTCCCAATGAGAGCTTCTACTCAGACTGGGCTAGCTCCAAGAACTTCTTCGTTGGGGACCAATTGGTTTTCAACTTGACTGCAAACCAGAACCTGGCTGATGTAACAAAGTCTGATTACGACAACTGCAGCGACGATGGTATCACATTCGCCGGAGACCAGAACGGTACGGTGTTTGGGTTTACTTTCGACCGACCCGGGCCTCGCTACTTCATCTGCACAGTTGATGACCACTGTGCAAGAGGCCAGAAGTTCGGAGTCAACGTTAATGAGTGGGCAAACTCTGCTGGTCCTGCAGCTCAACCACCATATTCTGCTCCAACACTGACTTTTGGAGCCTTATCTGCATTTCTTTCCAGCATAGCTTTCTATTTGTTCACCCGCATCTAA	501	0.477	MAKHIGLIGCSLVVMALLFGAAEARDYMVGDSFGWKIPPNESFYSDWASSKNFFVGDQLVFNLTANQNLADVTKSDYDNCSDDGITFAGDQNGTVFGFTFDRPGPRYFICTVDDHCARGQKFGVNVNEWANSAGPAAQPPYSAPTLTFGALSAFLSSIAFYLFTRI	166

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi13g0931	166	Gene3D	-	24	137	IPR008972	-
	Glsi13g0931	166	PANTHER	BLUE COPPER PROTEIN	25	133	IPR039391	GO:0009055
	Glsi13g0931	166	FunFam	Cupredoxin superfamily protein	24	132	-	-
	Glsi13g0931	166	Pfam	Plastocyanin-like domain	35	120	IPR003245	GO:0009055
	Glsi13g0931	166	SUPERFAMILY	Cupredoxins	23	126	IPR008972	-
	Glsi13g0931	166	ProSiteProfiles	Phytocyanin domain profile.	25	128	IPR003245	GO:0009055

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi13g0931	Glsi-ChrGlsi13	27611222	27611882	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi13g0931	5	144	Phytocyanin Superfamily	AT1G79800	36.111	1.17e-18	77.0

Showing 1 to 1 of 1 entries