Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0906 ATGCCTCCGAATCAACGGCAGAGAGCTCATATTGGCTCCACTGTTCTGTCTCTGATAATCTCCCTCCCTCTCCCTCTCGCTCTTGTCTTTCCTCTTTCTCTGCTTTTTGTTCTCTTCGGTTCTCTCTCTCTCTCTCTCATCGATTCAGGTTCAGAATTTTGTGGTCGAGAGAGGGAGAGAATGTCAGGAGGCACGCAGAATAGTCTGAGAAAAGCACTCGGAGCCCTGAAGGACACGACAACAGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTTAGAGCCACAAATCACGTGGAGCGTCCAGCTAAGGAAAAACATATAAGAGCCATTTTTTCTGCAATATCAGCTACTAGACCTCGGGCTGATGTTGCATACTGCATCCATGCTCTTGCAAGACGATTATCAAAGACACATAACTGGGCGGTTGCACTAAAAACTTTAATTGTTATTCATCGTGCTTTGAGGGAAGTGGATCCCACATTTCATGAAGAACTCATAAATTATGGCAGAAGCAGAAGTCATATGCTCAACATGTCTCATTTTAAAGATGATTCCAGCCCAAATGCGTGGGATTATTCTGGATGGGTTCGCACTTACGCATTATTTTTGGAAGAAAGACTTGAATGTTTTCGTGTATTGAAGTATGACATTGAGACAGATCGTCCAAGGACCAAAGATTTGGACACTACAGAATTGCTGGAGCAGTTGCCAGCATTACAAGAACTTCTCTTTCGAGTTCTTTGTTGTCAGCCAGAAGGGGCAGCTGTGAATAATTTTGTCATTCAATTAGCACTCTCAATGGTTGCTTCAGAAAGCATTAAAATTTACCAAGCTATCAGTGATGGCACAGTCAATTTGGTTGATAAGTTTTTTGAGATGCAACGCCATGATGCTTTGAAAGCTCTTGATATATACAGGAGGGCTGGGAAGCAGGCTGAGAGACTGTCGGAGTTTTATGAAATATGTGGAAATCTTGATGTTGGACGTGGACAGAAGTTTGTTAAAATTGAGCAGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTATGTCAAAGATGCTCCTAGAGATTCAACAATCCGCAAGGATCAGGTCATTGACAACACGATTGCTGCCCCAAAAGAAGTTTTGGCTATAGAATACAAAAAGACATCAGAAGTGCAGGAGGCACGTGCACCATCCCCACCTTCACCTCCGCCTCCTGAACCTGTAAAAGTGGAAGCACCTGCAGCACAACCACCACCGGATTTGTTGAATTTGGAGGATCCTGTTCCAGCCGCTGCAGAGTTGGAAGAAAAGAATGCCTTGGCATTAGCCATTGTACCAGTTGCTGATCCGCCAACTTCTTCTGTTTCAACTCAAGCAAATGGAACTACAGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCAAATGAGACTGCTACTGCAGCTAGCAAACTGGCTGGAGGTTTAGACAAGCTCACACTCGACAGCCTATATGATGATGCAGTCAGAAGAAACAGCCAGAATGTGAGCTATAACCCATGGGAGCCAGCACCTGTGGGACCCATGATGCAACAGACAATGTACGATCCATTTTTTGCCTCTCATACAGTAGCTGCTCCTCCTTCTGTTCAGATGGCAACTATGTCCAACCAGCAGCAGGCTTTCTTGTTGCAGCAGCAGCAGCAACAAATGATGATGATGGCTCCTCAGCAACCATCTGTAAATCCTTTTGGAAATCCTTATGGAGGAGCCTCTGTCCACCCCTATGGCTCCGGTATGCCTGTTCAAGCAGGCAATCCATATACCGGTCTCATCTAG 1827 0.4499 MPPNQRQRAHIGSTVLSLIISLPLPLALVFPLSLLFVLFGSLSLSLIDSGSEFCGRERERMSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSGWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDTTELLEQLPALQELLFRVLCCQPEGAAVNNFVIQLALSMVASESIKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGKQAERLSEFYEICGNLDVGRGQKFVKIEQPPASFLQAMEEYVKDAPRDSTIRKDQVIDNTIAAPKEVLAIEYKKTSEVQEARAPSPPSPPPPEPVKVEAPAAQPPPDLLNLEDPVPAAAELEEKNALALAIVPVADPPTSSVSTQANGTTGWELALVTAPSSNETATAASKLAGGLDKLTLDSLYDDAVRRNSQNVSYNPWEPAPVGPMMQQTMYDPFFASHTVAAPPSVQMATMSNQQQAFLLQQQQQQMMMMAPQQPSVNPFGNPYGGASVHPYGSGMPVQAGNPYTGLI 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0906 608 SUPERFAMILY GAT-like domain 229 360 - -
Glsi13g0906 608 MobiDBLite consensus disorder prediction 399 420 - -
Glsi13g0906 608 SMART enth_2 92 224 IPR013809 -
Glsi13g0906 608 CDD ANTH_N 94 217 - -
Glsi13g0906 608 SUPERFAMILY ENTH/VHS domain 93 225 IPR008942 -
Glsi13g0906 608 Gene3D ANTH domain 225 376 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Glsi13g0906 608 PANTHER CLATHRIN ASSEMBLY PROTEIN 69 562 IPR045192 GO:0048268|GO:0072583
Glsi13g0906 608 FunFam Clathrin assembly protein AP180 68 224 - -
Glsi13g0906 608 MobiDBLite consensus disorder prediction 392 420 - -
Glsi13g0906 608 Gene3D - 67 224 IPR008942 -
Glsi13g0906 608 Pfam ANTH domain 93 360 IPR011417 GO:0005543
Glsi13g0906 608 FunFam putative clathrin assembly protein At5g35200 226 378 - -
Glsi13g0906 608 ProSiteProfiles ENTH domain profile. 86 224 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0906 Glsi-ChrGlsi13 27371210 27379945 Dispersed/Wgd