Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0902 ATGGCGGGAAACGACTGGATAAACAGTTACTTGGAGGCGATACTGGATGTTGGGCCAGGTCTAGACGATGCCAAGTCCTCTTTGCTTCTCAGAGAGAGAGGGAGGTTCAGTCCCACTCGCTACTTCATCGCGGAGGTTATCTCTGGTTTTGATGAGACCGATCTCTACCGCTCTTGGGTTCGGGCCTCTGCAACGAGGAGTCCCCAGGAGAGGAATACTAGATTGGAGAATATGTGTTGGAGGATTTGGAACTTGGCCCGGCAAAAGAAGCAGCTTGAGAGTGAGGCAGCACAAAGGATGAATAAACGTCGCCTTGAACGTGAAAGAGGCCGCAGAGAAGCAACTGCTGATATGTCTGAGGACTTATCAGAGGGAGAAAAAGGAGATTCAGTGAGTGACATTTCAGCTCATGGTGATACTACTAAAGGCAGACTTCCCAGAATCAGTTCTGTTGATGCTATGGAGACATGGGCTAACAGTCAGAAGGGGAAGAAGCTCTATATTGTACTTATAAGCATTCATGGTCTCATAAGAGGTGAGAATATGGAGCTGGGACGTGATTCTGACACTGGTGGTCAGGTTAAGTATGTTGTGGAACTTGCAAGAGCCTTGGGTTCAATGCCAGGAGTTTACCGGGTTGATTTACTAACTAGACAAGTATCATCACCAGATGTAGACTGGAGTTATGGGGAGCCCACAGAAATGTTGAGTCCAAGAAACACAGATGATTTTGCAGATGATATGGGAGAGAGCAGTGGTGCTTATATCATTCGTATACCCTTTGGTCCAAGAGATAAATATATTCCCAAAGAAGATCTCTGGCCGTACATTCCTGAATTTGTTGATGGTGCTCTTAACCACATTATACAGATGTCAAAAGCTCTTGGGGAACAAATTAGTGGTGGGCATGCCGTCTGGCCTGTTGCCATTCATGGACATTATGCGGATGCGGGTGACTCAGCTGCTCTTCTATGTGGTGCTTTAAATGTTCCAATGCTTTTTACTGGCCACTCACTTGGTCGAGATAAGTTAGAACAACTTTTAAAGCAAGGTCGACTATCAAAGGATGAAATAAATACAACATACAAGATTATGCGTCGAATAGAAGCTGAGGAATTAGCCCTTGATGCTTCTGAAATAGTCATAACAAGCACTAGACAAGAAATAGAACAACAATGGCGTTTGTATGATGGCTTTGATCCAGTATTGGAGCGTAAAATCCGAGCAAGGATTAGGCGTAATGTGAGTTGTTATGGTAGATTCATGCCTCGCATGGCGATAATTCCACCTGGTATGGAGTTCCATCACATAATTCCACAAGATGGTGATATAGAAGGTGAACCAGATGGGAATTTGGATCATCCTGCCCCCCAAGATCCACCTATTTGGTCTGAGATAATGCGGTTCTTTACCAACCCTCGCAAACCAATGATACTTGCACTTGCTAGACCAGACCCGAAAAAGAACATCACAACTTTGGTCAAAGCATTTGGAGAATGCCGTCCCCTACGAGAGCTTGCTAACCTAACGTTAATTATGGGTAACCGAGATGGAATTGATGAAATGTCAAGCACAAATTCTTCTGTTCTTCTCTCGGTACTTAAGCTGATTGACAAGTATGATTTGTATGGGCAAGTTGCGTATCCTAAGCACCACAAACAGTCTGATGTACCTGACATATATCGTCTAGCTGCAAAGACAAAGGGTGTTTTTATTAATCCAGCTTTTATTGAGCCATTCGGTCTTACCTTAATTGAGGCAGCTGCTTATGGGTTGCCAATGGTTGCAACAAAAAATGGAGGTCCTGTTGATATTCATCGGGTACTTGACAATGGTCTACTTGTAGATCCCCATGATCAGCAGTCTATTTCAGATGCTCTTTTGAAGCTTGTTAGCAACAAGCAACTATGGGCAAAATGTAGACAGAATGGGTTGAAGAATATTCATCTATTTTCATGGCCTGAACATTGCAAGACTTACCTGTCTAAAATAGCCACTTGCAAACCAAGGTATCCACAATGGCTGCGAAATGATGATGGAGCTGAAAGTTCAGAATCAGAATCACCCGGTGATTCGTTGAGAGATATACATGATCTATCTCTAAACCTGAAGTTTTCACTGGATGGAGAGAAGAGCGGGGGCAGTGTAAATGATAATTCCTTGGAGTCTGAAGGAAGTGCTGATAGAAACACTAAATTGGAGAATGCTGTTATGTCATGGTCAAAGGGCATCTCTAAGGACACGCGCAAGGGTGGGGCTACAGAGAAATCAGATCAAAATTCAAATGCTGGTAAATTTCCACCATTGAGGAGGAGGAAGCATCTCTTTGTCATTGCAGTGGACTGTGATACTACTGAAGGCCTTCTCGAAATCACTAAAGTGATCTTTGAGTCTGCAGGAAAGGAGAGTGGTGAAGGCTCTGTAGGGTTCATTTTGTCAACATCCTTAACGATATCTGAGATACACTCATTCCTGGTATCAGGAGGCTTGAGTCCTAATGATTTTGATGCTTATATTTGCAACAGTGGTAGTGATCTTTACTATCCGTCCATCAATTCTGAAGGTCGGCCCTTTGTGGTTGACTTGTATTACCACTCTCACATTGAATACCGTTGGGGTGGAGAAGGGTTGAGGAAGACTTTGGTGCGTTGGGCAGCATCAATCACTGATAAGAAGGCTGATAATGAAGAACAATTTGTGACTCCTTCTGAACAGCTTTCTACTGACTACTGTTATGCTTTCAAAGTGCACAAACCAGGAATGATTCCCCCTTTGAAGGAACTTCGTAAGTTTCTCAGAATACAGGCTCTACGATGCCATGCTATTTATTGTCAAAATGGGACAAGACTGAATGTGATTCCAGTTCTGGCATCTCGTTCCCAAGCCCTCAGGTACCTTTATGTTCGATGGGGTTTTGAGCTGTCAAAGATGGTGGTGTTTGTTGGAGAATGTGGTGACACTGATTATGAAGGATTGCTTGGTGGTCTACACAAAAGTGTTAAACTGAAGGGTGTTGGTAGTGGTGCAATCAGTCAACTCCATAACAATAGAAGCTATCCTCTTTCAGATGTCATACCACTGGATAGCCCCAAAATTGTTGAGGCAAGTGAGGGGAGTAGCGGTGCTGATATCCGCGCTTTGATAGAAAAAGTAGGATTTCACACGGACTAA 3171 0.4361 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFIAEVISGFDETDLYRSWVRASATRSPQERNTRLENMCWRIWNLARQKKQLESEAAQRMNKRRLERERGRREATADMSEDLSEGEKGDSVSDISAHGDTTKGRLPRISSVDAMETWANSQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLSPRNTDDFADDMGESSGAYIIRIPFGPRDKYIPKEDLWPYIPEFVDGALNHIIQMSKALGEQISGGHAVWPVAIHGHYADAGDSAALLCGALNVPMLFTGHSLGRDKLEQLLKQGRLSKDEINTTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPVLERKIRARIRRNVSCYGRFMPRMAIIPPGMEFHHIIPQDGDIEGEPDGNLDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTNSSVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISDALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCKTYLSKIATCKPRYPQWLRNDDGAESSESESPGDSLRDIHDLSLNLKFSLDGEKSGGSVNDNSLESEGSADRNTKLENAVMSWSKGISKDTRKGGATEKSDQNSNAGKFPPLRRRKHLFVIAVDCDTTEGLLEITKVIFESAGKESGEGSVGFILSTSLTISEIHSFLVSGGLSPNDFDAYICNSGSDLYYPSINSEGRPFVVDLYYHSHIEYRWGGEGLRKTLVRWAASITDKKADNEEQFVTPSEQLSTDYCYAFKVHKPGMIPPLKELRKFLRIQALRCHAIYCQNGTRLNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLLGGLHKSVKLKGVGSGAISQLHNNRSYPLSDVIPLDSPKIVEASEGSSGADIRALIEKVGFHTD 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0902 1056 Gene3D Glycogen Phosphorylase B; 432 652 - -
Glsi13g0902 1056 MobiDBLite consensus disorder prediction 94 133 - -
Glsi13g0902 1056 MobiDBLite consensus disorder prediction 94 143 - -
Glsi13g0902 1056 MobiDBLite consensus disorder prediction 744 767 - -
Glsi13g0902 1056 FunFam Sucrose-phosphate synthase 1 435 652 - -
Glsi13g0902 1056 FunFam Sucrose-phosphate synthase 2 168 434 - -
Glsi13g0902 1056 NCBIfam sucrose-phosphate synthase 1 1051 IPR012819 GO:0005985|GO:0046524
Glsi13g0902 1056 Pfam Sucrose-6F-phosphate phosphohydrolase 836 986 IPR006380 -
Glsi13g0902 1056 CDD GT4_sucrose_synthase 167 662 - -
Glsi13g0902 1056 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 182 662 - -
Glsi13g0902 1056 CDD HAD_SPS 775 1005 IPR035659 -
Glsi13g0902 1056 Gene3D Glycogen Phosphorylase B; 168 664 - -
Glsi13g0902 1056 Pfam Glycosyl transferases group 1 471 645 IPR001296 GO:0016757
Glsi13g0902 1056 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1051 - -
Glsi13g0902 1056 Pfam Sucrose synthase 250 391 IPR000368 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0902 Glsi-ChrGlsi13 27343347 27350019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0902 1 1043 Glycosyltransferase AT5G20280 77.629 0.0 1662