Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0900 ATGGACGTTTGGTTGGAATGTTGGTTGGCAAAATCTTCGGTGTTCAGTCTTAACCATGGCTTCTATGCTGTACTGGGTGCTGCTTCCTTTCTTTGTGGATCTATGAGAACGACAGTTTCTCTATGCGTAATTATTCTAGAACTGACCAATAACTTGTTATTGTTACCCTTAATAATGCTGCTGCTTCTGGTATCCAAGACAGTGGCAGATGCTTTCAATGCTAATATATACGACCTTATTATGAAAGCCAAGGGATTCCCTCATTTAGAAACTCATGCCGAGCCATATATGAGGCAGCTAACAGTAGGAGATGCAGGCCCAGGTCCACTTCAGCTCTTTAATGGCATTGAGAAGGTTCGTAATAGTGTTTATTCTCAAGACTACAAGCCACAATGGGGTTCCCCCTAA 408 0.424 MDVWLECWLAKSSVFSLNHGFYAVLGAASFLCGSMRTTVSLCVIILELTNNLLLLPLIMLLLLVSKTVADAFNANIYDLIMKAKGFPHLETHAEPYMRQLTVGDAGPGPLQLFNGIEKVRNSVYSQDYKPQWGSP 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0900 135 Gene3D Clc chloride channel 3 90 - -
Glsi13g0900 135 PRINTS Chloride channel signature 38 57 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Glsi13g0900 135 PRINTS Chloride channel signature 76 90 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Glsi13g0900 135 PRINTS Chloride channel signature 20 36 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Glsi13g0900 135 SUPERFAMILY Clc chloride channel 15 91 IPR014743 -
Glsi13g0900 135 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 13 121 - -
Glsi13g0900 135 Pfam Voltage gated chloride channel 16 70 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0900 Glsi-ChrGlsi13 27322669 27323076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0900 16 135 Ion Channels AT5G33280 69.167 3.70e-42 145