Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0889 ATGGGGGTAACGATTCTCCCAGATCTCGGAACGGAGATTCTGATTCCGGTGTGTGCCGTCATCGGAATTGTGTTCGCTTTGTTTCAATGGATTATCGTTTCGAAAGTCAAGCTCTCAGCTGGTAGAGATAATTCTCCGAATAGCGCAGGCAAGAATGGGTACTCTGATTATCTCATCGAAGAAGAGGAGGGTATCAACGACCACAACGTTGTCATCAAATGTGCTGAAATTCAGAACGCTATATCCGAAGGGGCAACATCTTTCCTTTTTACTGAATATAAGTATGTGGGAATCTTCATGGTAGCTTTTGCAATCTTGATATTCCTTTTCCTTGGCTCTGTGGAGGGATTCAGTACTGGTCCTAAGCCTTGCACTTTTGACCAAACTAGAATGTGTAAGCCGGCTCTTGCAACTGCTATTTTCAGCACTATATCTTTCATGCTTGGTGCCGTCACATCAGTTGTTTCTGGTTTCCTTGGGATGAAAATTGCAACTTATGCAAATGCAAGAACTACACTAGAGGCAAGAAAGGGAGTTGGGAAGGCTTTCATTACTGCATTTAGATCTGGTGCAGTTATGGGATTCCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTACTATCAACCTATTCAAGCTTTACTATGGTGATGATTGGGGTGGTCTTTTTGAGGCTATCACTGGTTATGGTCTTGGTGGATCTTCTATGGCTCTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAAGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAAAGAAACATTCCTGAGGATGATCCAAGAAATCCAGCTGTTATAGCGGATAACGTTGGTGATAATGTTGGGGATATAGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAGTCATCCTGTGCTGCCCTTGTTGTTGCTTCCATCTCCTCATTTGGGGTTAATCATGAGTTCACTGCAATGTTATTTCCTCTCATCATCAGTTCCATCGGTATTGTTGTCTGTTTGCTTACCACCTTATTTGCAACTGACTTTTTTGAGATCAAGGCTGTAAAGGAAATTGAGCCAGCATTGAAAAAACAACTCATCATTTCCACTGTTTTGATGACTATTGGGATTGCAATTGCTAGTTGGATTGCACTTCCATCTTCCTTCACTATCTTCAATTTTGGAGAGCAGAAAGCTGTGAAGAATTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTATGGGCAGGTCTTATTATTGGCTTTGTGACTGAGTACTATACCAGCAATGCTTATAGCCCTGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCTACTAATGTTATATTTGGTCTTGCCTTGGGATACAAGTCTGTCATTATTCCAATTTTCGCTATTGCAGTTAGCATATTTGTTAGTTTCAGCTTTGCTGCCATGTATGGTATTGCGGTTGCTGCACTTGGGATGCTGAGCACCATTGCAACTGGTTTGGCCATTGATGCATATGGTCCAATTAGTGACAATGCAGGAGGTATTGCTGAGATGGCAGGCATGAGTCACAGAATTCGAGAGAGAACTGATGCCCTTGATGCTGCAGGAAATACAACTGCTGCTATTGGAAAGGGGTTTGCTATTGGTTCTGCTGCCTTGGTGTCTCTTGCACTTTTTGGTGCCTTTGTGAGCAGGGCTGCTATTTCAACAGTTGATGTGCTGACTCCAAAGGTTTTTATTGGTTTAATTGTGGGTGCAATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTACGTAGGCAATTCAATACCATCCCGGGTCTGATGGAGGGCACCACCAAGCCTGACTATGCTACGTGTGTTAAGATCTCCACTGATGCCTCCATTAAAGAGATGATACCACCTGGTGCTCTTGTCATGCTTACCCCCCTTATTGTTGGAATTATTTTTGGTGTAGAAACGCTATCTGGTGTTCTTGCTGGATCCCTCGTATCTGGTGTACAGGTTGCTATCTCTGCATCCAACACTGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCTTCAGAGCATGCAAGAACCCTTGGTCCAAAAGGGTCGGATCCACACAAAGCGGCTGTTATCGGTGATACCATTGGAGATCCTCTCAAGGATACCTCTGGACCATCACTTAACATCCTTATCAAGCTGATGGCTGTTGAGTCTCTTGTGTTTGCTCCTTTCTTCGCAACACATGGTGGCCTGATCTTCAAGATCTGA 2298 0.4408 MGVTILPDLGTEILIPVCAVIGIVFALFQWIIVSKVKLSAGRDNSPNSAGKNGYSDYLIEEEEGINDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTGPKPCTFDQTRMCKPALATAIFSTISFMLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHEFTAMLFPLIISSIGIVVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTVLMTIGIAIASWIALPSSFTIFNFGEQKAVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIIFGVETLSGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLIFKI 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0889 765 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Glsi13g0889 765 NCBIfam V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Glsi13g0889 765 PIRSF H+-PPtase 11 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Glsi13g0889 765 Pfam Inorganic H+ pyrophosphatase 21 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Glsi13g0889 765 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0889 Glsi-ChrGlsi13 27246669 27251598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0889 5 629 Primary Pumps ATPases AT1G15690 87.739 0.0 1119