Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0876 ATGGTGAATTTAAAAGGAGGTACCAGACCACCATGGGTGGGGCTTGGAGCCGCTGTCTGGGTTCAAATAGCTTCGGGAAATTCCTACACCTTCCCACTCTACTCTCACTCTCTCAAATCCGTTTTGGGTTTCAACCAGCGTCAGGTTACCCTGCTTGGTGTCGCCAACGATATTGGCGAGAATGTTGGCCTGCTTCCTGGTATCGCCTGCAACAAGTTCCCACCTTGGATTATTCTTTCCGTAGGCGCTCTCGCCTCTTTTCTTGGCTATGGTGTTCTATGGCTCACTGTTACTAAGACTGTTACCTCTCTTCCTTACTGGTTGCTATGGATTGCCCTCTCTGTTGCCGCCAACAGTAGTGCATGGTTAAGCACTGCTGTTCTAGTAACCAACATGAGGAACTTCCCTATCAATAGAGGCACAGTGGCAGGAATTCTTAAAGGTTATGGAGGACTAAGTGCTGCAGTTTTCACTGAAATTTACAGCATACTGCTTTATAATTCTTCTTCTAAGTTCCTCTTGTTCCTGGCCATTGGTATTCCTGCCTTATGTATCACTATGATGTTCCTTGTTAGACCTTGTACTCCAGCTTCTGGCGAAGACTCCTCAGAAAATGGTCATTTTCTCTTCATCCAAGCTTCTAGTGTCGTCTTAGGTTTCTATCTTCTTGCAACCACAATACTTAGTAACGTCGCTCCCTTAAGTGGTACAGTTTCCTATGTTTTGGTTGTTTTTATGATTCTCCTTCTCATGGCCCCGCTTGCTATCCCTATAAAAATGACTGTGTGTAATAGAATAGCCATCAAACCAGAGACACCGGAGTGTCTGATTCAAGAGAACAAGGATGAGAAAACACAACCGCTGCTGCTACCATCTTCGTCATCAGCAACTCTTGGAAGTTTTCATGATATTGATGATTCATCTGAGGTTGCTATGCTCCTTGCTGTGGGTGAGGGAGCAGTGAAGAAGAAGAGAAGACCAAAAAGAGGGGAAGATTTTAAATTTGGTGAGGCTGTGATAAAGGCTGATTTCTGGCTGCTATTTCTGGTTTTCTTTGCTGGTGTTGGAACAGGGGTTACTGTTCTTAATAATCTGGCCCAGATTGGCATTGCACGAGGTGCAGAAGATACTACAATCTTATTGTCAAGCTTCAGCTTTTGCAATTTCGTGGGTCGGCTTGGTGGAGGAGCTGTTTCTGAACATTTTGTCAGAACAAGAACAATCCCACGAACATTTTGGATGACATGCACTCAGACAACAATGATAATCTCGTACCTCCTGTTTGCATATGCTGTCAGTGGCACCCTTTACCTTGCAATTGCATTCCTTGGCATCTGCTATGGCGTTCAGTTCTCAGTCATGATCCCTACTGTGTCTGAGCTATTTGGGTTGAAGCACTTTGGAATACTCTACAATTTCATGTGCTTGGGAAACCCTCTTGGTGCCTTCCTTTTCTCTGCTCTATTAGCAGGTAATGTCTATGATACTGAGGCAGCAAAGCAGCACGGTCTGAGCCACCTGGTTACTTCTTCGAGTGTGTCCTGCCTGGGTCCAAATTGCTTCAGGCTAACCTTCTTGGTTCTGGCTGGTGTTTGTGCTGTGGGCACCGTCTTGAGCATCGTCCTCACTTTGAGGATAAAACCTGTTTATCAGATGCTTTATTCTGGGGGTTCTTTCAGGCTGCCTCAAACTTCAAGTCACTGA 1704 0.4525 MVNLKGGTRPPWVGLGAAVWVQIASGNSYTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNKFPPWIILSVGALASFLGYGVLWLTVTKTVTSLPYWLLWIALSVAANSSAWLSTAVLVTNMRNFPINRGTVAGILKGYGGLSAAVFTEIYSILLYNSSSKFLLFLAIGIPALCITMMFLVRPCTPASGEDSSENGHFLFIQASSVVLGFYLLATTILSNVAPLSGTVSYVLVVFMILLLMAPLAIPIKMTVCNRIAIKPETPECLIQENKDEKTQPLLLPSSSSATLGSFHDIDDSSEVAMLLAVGEGAVKKKRRPKRGEDFKFGEAVIKADFWLLFLVFFAGVGTGVTVLNNLAQIGIARGAEDTTILLSSFSFCNFVGRLGGGAVSEHFVRTRTIPRTFWMTCTQTTMIISYLLFAYAVSGTLYLAIAFLGICYGVQFSVMIPTVSELFGLKHFGILYNFMCLGNPLGAFLFSALLAGNVYDTEAAKQHGLSHLVTSSSVSCLGPNCFRLTFLVLAGVCAVGTVLSIVLTLRIKPVYQMLYSGGSFRLPQTSSH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0876 567 SUPERFAMILY MFS general substrate transporter 218 548 IPR036259 -
Glsi13g0876 567 Pfam Nodulin-like 11 258 IPR010658 -
Glsi13g0876 567 Gene3D MFS general substrate transporter like domains 340 550 IPR036259 -
Glsi13g0876 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 551 - -
Glsi13g0876 567 CDD MFS_Mch1p_like 10 536 - -
Glsi13g0876 567 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0876 Glsi-ChrGlsi13 27166555 27169255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0876 5 567 Nodulin-like Gene Family AT1G80530 57.345 0.0 670
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0876 13 27166555 27169255 Glsi13g0876 13 27166555 27169255 ECH