Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0870 ATGGCCATGGCTGCTTCTCCTTTCCTTTACCCTCTCCATAAACTTAAACTCCCAAAATGCCCATATGTTTCTCTTAAATCCCACTTTCCTCCTCGCCTCTACTCTCTCCCTAGCCGCTTCCCCTCCGCCTCAACCATTCGTGCAACCTCCGCTGTTGCTGTGGAGTCGGATATAAGTACGCAGCAGGATCAAGCAAAGGAAGTTGACTTTTTCGCATGCCCGATATGTTATGAACCCTTGATAAGGAAAGGTCCTTCTGGTATTAACTTATCAGCAATCTACAGGTCCGGTTTTAAGTGTAAAAGGTGCAATAAGTCATACTCCAGCAAGGACATGTATCTGGATCTGACTGTTACTGCTGGGTTGAGGGATTACACTGAAGTTCAACCAGCTAGGACTGAGCTTTTCAGGAGTCCACTTGTTTCATTCTTGTATGAAAGAGGCTGGCGTCAGAATTTCAGTCGAAGTGGCTTTCCTGGTCCTGATGAAGAGTTCAAAATGGCTCAAGAGTACTTCAAATCTGCTGAAGGTGGTGTTCTCGTTGATGTTAGCTGTGGTAGTGGTTTATTTTCCAGAAAATTCGCCAAATCTGGAAGCTATTCTGGAGTCATTGCCCTAGATTTTTCTGAAAATATGCTTCGCCAGTGTTACAATTTCATTAAGAAAGATGACACTCTTTCAACCAGTAATCTTGCTCTTGTAAGGGCAGATGTTTCTAGGCTTCCTTTCTCATCAGGTTCAGTTGACGCTGTTCACGCTGGTGCAGCCTTGCATTGCTGGCCATCTCCCTCCAATGCTGTTGCTGAAATCACCCGGGTACTAAGAAGCGGTGGAATCTTTGTTGGAACCACTTTTCTGCGTCACACATCATCAACTCCCTGGATTTTACGCCCTTTCAGACAGAGAATTCTACAGGGCTATAGCTATTTGACAGAGGAAGAGATCGAAGACCTTTGCACATCATGCGGCCTTACCAATTACTCAAGCAATGTTCAGCAGTCTTTTATTATGTTTACTGCTCAGAAGCCTTGA 1032 0.4477 MAMAASPFLYPLHKLKLPKCPYVSLKSHFPPRLYSLPSRFPSASTIRATSAVAVESDISTQQDQAKEVDFFACPICYEPLIRKGPSGINLSAIYRSGFKCKRCNKSYSSKDMYLDLTVTAGLRDYTEVQPARTELFRSPLVSFLYERGWRQNFSRSGFPGPDEEFKMAQEYFKSAEGGVLVDVSCGSGLFSRKFAKSGSYSGVIALDFSENMLRQCYNFIKKDDTLSTSNLALVRADVSRLPFSSGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGIFVGTTFLRHTSSTPWILRPFRQRILQGYSYLTEEEIEDLCTSCGLTNYSSNVQQSFIMFTAQKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0870 343 Gene3D Vaccinia Virus protein VP39 136 342 IPR029063 -
Glsi13g0870 343 CDD AdoMet_MTases 180 286 - -
Glsi13g0870 343 PANTHER METHYLTRANSFERASE 78 328 - -
Glsi13g0870 343 FunFam Putative methyltransferase, chloroplastic 136 342 - -
Glsi13g0870 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 143 342 IPR029063 -
Glsi13g0870 343 Pfam Methyltransferase domain 181 281 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0870 Glsi-ChrGlsi13 27128022 27132143 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi13g0870 Methyltransf_11 1.3e-20 CL0063