Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0836 ATGATAAAGGGGATTTTAGGGTTCCCGCTTCTGCGGCTTCTTGTCATCGTCTTCGATCTTCTGCAGCCGAAAATGCCTTCGCACAAGACTTTCATGATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCCATTCCTTTTTGGATTCGGATGAGGACGGATAACACCATCAGGTATAATGCTAAGCGCAGGCACTGGCGCCGCACCAAACTCGGGTTTTAA 228 0.4912 MIKGILGFPLLRLLVIVFDLLQPKMPSHKTFMIKKKLAKKMRQNRPIPFWIRMRTDNTIRYNAKRRHWRRTKLGF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0836 75 Hamap 50S ribosomal protein L39e [rpl39e]. 25 75 IPR000077 GO:0003735|GO:0005840|GO:0006412
Glsi13g0836 75 Gene3D Ribosomal protein L39e 25 75 IPR023626 -
Glsi13g0836 75 FunFam 60S ribosomal protein-like L39 25 75 - -
Glsi13g0836 75 ProSitePatterns Ribosomal protein L39e signature. 54 70 IPR020083 GO:0003735|GO:0005840|GO:0006412
Glsi13g0836 75 SUPERFAMILY Ribosomal protein L39e 27 74 IPR023626 -
Glsi13g0836 75 PANTHER RIBOSOMAL PROTEIN L39E 17 75 - -
Glsi13g0836 75 Pfam Ribosomal L39 protein 33 73 IPR000077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0836 Glsi-ChrGlsi13 26923077 26923913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0836 25 75 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 92.157 2.80e-30 99.4