Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0785 ATGGCGGCATTTCAAGGCAAAGCCTGTGATCTCTTGCTCTTGTTTCTGTGCTTGTTCATCTTCTCATCATCTTCTTCGTCGTCCATTAATCTTGCTGTGCCAAGACAGCAAGAGCAAGATCGAATCTCGGCTCTCCCGGGGCAGCCCCGTGTGAGGTTCCGGCAGTTCTCCGGCTACGTCACAGTCAACGAGCGACATGGCCGAGCACTCTTCTACTGGTTCACTGAAGCCTTCTCTTCCCCAGAGATTAAACCTCTTGTCCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCGGTGGCATATGGGGCATCAGAGGAAATTGGGCCATTCCGGATAAACAAAACCGATTCTTCTCTATATCTTAACAAATATGCATGGAACACAGAAGCAAATATTCTCTTTCTTGAATCGCCTGCTGGTGTTGGTTTCTCCTACACAAATACAAGCTCCGACCTCAAAACTTCTGGGGACAAAAGGACAGCTCAGGATGCTCTGGTTTTCCTACTCAGATGGATGTCAAGGTTTCCACAATATAAATACAGGGAGTTCTACATCGCCGGGGAGAGCTATGCAGGGCATTACATTCCCCAGTTGGCTAAGCAAATCTATGATTATAACAAAGCAAATCCCCATATCATCAATCTCAAAGGGTTCATTGTCGGAAATGCTGTGACTGATAACTACAATGATGGGATTGGAACTGTCACATATTGGTGGAGCCATTCTATGATATCTGATCTTACATACAAATCAATCCTCAAGTACTGCAATTTCACCGCAGAGAAAACTTCTAAAAAATGTGATGATGTTATGAGTTATGCTGTGAACCATGAATTTGGAAACATTGATCAATATAGTATTTATACTCCCCCGTGCCCAACACCGCATAACGATACCATACAGTACATAAGGTTCAAGAGTACAATTTTACATAGGTTTTCAGGGTATGATCCATGTACAGAAGATTATGCAGAGAAATATTATAATCGTCCTGAAGTGCAGAAAGCCATGCATGCAAATGTTACAAACATTCCTTACAAATGGACTTCTTGCAGCGAAGTGCTCATAAAAAACTGGAAGGACTCTGAAGTTTCTGTATTACCAATATACAAAGAATTAATTGCAGCAGGTTTAAGAATCTGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTGACAGCCACAAGGTTTTCCCTCAACCATCTCAACCTCACCATTAAAACTCGTTGGTATCCATGGTACTCGGGTAAACAGGTAGGTGGTTGGACAGAGGTGTATGAAGGGCTAACCTTTGTAACAGTGAGAGGAGCTGGACATGAAGTACCACTATTTCAGCCTAAGCGAGCATTCATACTCTTCAGATCATTCTTAGCAGGGAAGGAGCTACCTAAGTTACTGGTAAAAAAATAG 1413 0.4345 MAAFQGKACDLLLLFLCLFIFSSSSSSSINLAVPRQQEQDRISALPGQPRVRFRQFSGYVTVNERHGRALFYWFTEAFSSPEIKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTDSSLYLNKYAWNTEANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALVFLLRWMSRFPQYKYREFYIAGESYAGHYIPQLAKQIYDYNKANPHIINLKGFIVGNAVTDNYNDGIGTVTYWWSHSMISDLTYKSILKYCNFTAEKTSKKCDDVMSYAVNHEFGNIDQYSIYTPPCPTPHNDTIQYIRFKSTILHRFSGYDPCTEDYAEKYYNRPEVQKAMHANVTNIPYKWTSCSEVLIKNWKDSEVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTRWYPWYSGKQVGGWTEVYEGLTFVTVRGAGHEVPLFQPKRAFILFRSFLAGKELPKLLVKK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0785 470 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Glsi13g0785 470 Gene3D - 319 355 - -
Glsi13g0785 470 Gene3D alpha/beta hydrolase 36 294 IPR029058 -
Glsi13g0785 470 FunFam Carboxypeptidase 315 463 - -
Glsi13g0785 470 Gene3D - 366 460 - -
Glsi13g0785 470 SUPERFAMILY alpha/beta-Hydrolases 37 463 IPR029058 -
Glsi13g0785 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 447 IPR001563 GO:0004185|GO:0006508
Glsi13g0785 470 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Glsi13g0785 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Glsi13g0785 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Glsi13g0785 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Glsi13g0785 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Glsi13g0785 470 FunFam Carboxypeptidase 366 460 - -
Glsi13g0785 470 FunFam Carboxypeptidase 36 294 - -
Glsi13g0785 470 Pfam Serine carboxypeptidase 47 459 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0785 Glsi-ChrGlsi13 26582424 26588442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0785 324 463 Calmodulin-binding Proteins AT2G22960 29.787 3.68e-15 72.0