Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0778 ATGCAGCAAGGTGATCAAACGGTGCTAAGCTTGAGGCCTGGTGGTGGTCGTGGCGGCGGCGGCGGCAGGCTTCTTGGTTCTCGATTCGACTCGTCATCATCAGCATCTTCTGCTGCCCCTGCTTTTGGTCCCTTTTCCTCTGATCTTCCTCTCTTGCGTCCCCATGGCGGTGCTTCTCCCTTTTCTATAAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGAGTGCAATACACAAGAGATAAGCTTTTACAGCTGAGGGAGGTTGTTGAGATCCCGGATGATATTCTAAAAATTAAACAAGATATAGAAGCTGAACTTTTTGGTGAAGATCAAAGCTGGGGCCATGCGGAAAATTCTACGCAACAATTTCAAAATCGATATTCTGAACCTGACAACCGTGACTGGCGTGGTCGGTCTGGACAACATCCTGCTTCTGCAGAAGAGAGGTCTTGGGAAAATCTAAGAGAGAACAGAGAGTTTGGGAATCGATTTGACTCTAGACAGCTGGATGCTAGTCAGGTTAATCGCCAGGACCAAGTGAATTCTCAGTTTGGAAGGGCTGTTATTTCTTCTAATCAAGTGGGTGGACCTGCTCCTACTCTAGTTAAAGCTGAGGTGCCATGGTCAGCTAGAAGGGGAAGTCTATCTGAAAAGGATCGTGTATTGAAAACTGTGAAAGGAATCCTAAATAAGCTGACTCCTGAGAAATTTGATCTCCTGAAAGGTCAATTGATTGATGCTGGAATTACATCAGCTGACATCTTGAAGGGAGTCATTTCACTTATATTTGATAAGGCTGTGCTAGAACCGACGTTTTGCCCCATGTATGCTCTTCTGTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGAACCTGATGGGAAAGAAATAACTTTTAAGCGGGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTGAGGGAAGAAGTGAGGCAGATGACAGCCCCTGAGCAGGAGATGGAGCGTAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAACATCCGTTTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAAATTGTCCATCACATTGTTCAGGAACTCTTAGGACCTCCTGATAGTAAGTCCTGTCCAGCCGAGGAAAATGTTGAAGCTATATGTCAGTTTTTTAATACCATCGGTAAGCAACTTGATGAGAGTCCAAAGTCACGGCGTATAAATGATGTGTATATTAGCCGTTTGAAAGAACTGAGCACAAACCCCCTACTTGTACCACGGTTAAGGTTCATGGTTCGCAACGTTCTAGACTTGCGGGTTAATAACTGGGTTCCAAGACGGGAAGAGGTGAGAGCAAAAACCATCACTGAAATCCATTCAGAGGCTGAAAAAAATCTTGGATTGCGTCCAGGCGCCACTGCAAGCATTAGAAATATCCGTGTAGTTTCTGGTGTTCAAGGAAATACCGGCCCCGGCGGATTCCCCATTGCTCGACCTGGTACAGGAGGCTTGATGCCTGGAATGCCAGGGACTAGGAAGATGCCTGGGATGCCAGGAATTGATAATGAAAACTGGGAGATGCCTAGGACGCGGTCAATACCAAGAGGAGACATGCCAGGTGTGCAAGCTGGAGGACGTGGCCAGTCTCCTTTACTTTCGAAGGCATCAACCCTGAATTCAAAGTTGTTACCTCAAGGCAGTGGTGGTCTTATAAGTGGTAGAAGCAGTGCCCTAGTGCATGGAGGTGGTGCTTCTCCTGGTCGTCCATCAAACTTCAGTTCTGAAACTGAACCTGTACCTCAATACCCTACATCTGTTAAAGCCGTTCCTGCTGTGTTGTCTGAGAAGCCACAGGCTCCAGCTCCAAGATTGAATACCAATGATCTTCGCCGCAAAACTGTCTCACTTCTGGAGGAATATTTTAGTGTCCGGCTTTTGGATGAGGCATTACAGTGCGTGGAAGAACTAAAATCTCCAGCTTACCATTCCGAGTTTGTCAAGGAGGCCATTTCCCTTGCACTAGATAAAAGTCCTCCCTGTGTTGAACCTGTTGCCAATCTTCTTGAGTATCTTTTCATTAAGAAGATTCTTGCAGCTATAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTCTGCTGGATGACATTGGCATAGATTTACCCAAAGCACCAAGTAACTTTGGTGAGATAATTGGGAAACTAATTTTGGCTGGGGGATTGGATTTTAAGGTGGCGAGGGAGATCCTAAAGAAGGTGGAAGATGACTGGTTCCAGAAAGCAATATTTGATGCCGCAATAGGGGTCATCAGTTCTGCATCTGGGCAAGCTTTGTTAGATTCACAAGCATCTGATATTGAGGCTTGTCGGAGTCTGATCAAGTGA 2403 0.4603 MQQGDQTVLSLRPGGGRGGGGGRLLGSRFDSSSSASSAAPAFGPFSSDLPLLRPHGGASPFSIKAGDSRFEGRERVQYTRDKLLQLREVVEIPDDILKIKQDIEAELFGEDQSWGHAENSTQQFQNRYSEPDNRDWRGRSGQHPASAEERSWENLRENREFGNRFDSRQLDASQVNRQDQVNSQFGRAVISSNQVGGPAPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPDGKEITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKSCPAEENVEAICQFFNTIGKQLDESPKSRRINDVYISRLKELSTNPLLVPRLRFMVRNVLDLRVNNWVPRREEVRAKTITEIHSEAEKNLGLRPGATASIRNIRVVSGVQGNTGPGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNENWEMPRTRSIPRGDMPGVQAGGRGQSPLLSKASTLNSKLLPQGSGGLISGRSSALVHGGGASPGRPSNFSSETEPVPQYPTSVKAVPAVLSEKPQAPAPRLNTNDLRRKTVSLLEEYFSVRLLDEALQCVEELKSPAYHSEFVKEAISLALDKSPPCVEPVANLLEYLFIKKILAAIDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDFKVAREILKKVEDDWFQKAIFDAAIGVISSASGQALLDSQASDIEACRSLIK 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0778 800 MobiDBLite consensus disorder prediction 113 151 - -
Glsi13g0778 800 Pfam MIF4G domain 223 449 IPR003890 GO:0003723|GO:0005515
Glsi13g0778 800 MobiDBLite consensus disorder prediction 1 47 - -
Glsi13g0778 800 Gene3D - 628 794 - -
Glsi13g0778 800 MobiDBLite consensus disorder prediction 130 151 - -
Glsi13g0778 800 MobiDBLite consensus disorder prediction 528 559 - -
Glsi13g0778 800 SMART ma3_7 636 748 IPR003891 -
Glsi13g0778 800 MobiDBLite consensus disorder prediction 572 608 - -
Glsi13g0778 800 ProSiteProfiles MI domain profile. 635 757 IPR003891 -
Glsi13g0778 800 SMART if4_15 223 449 IPR003890 GO:0003723|GO:0005515
Glsi13g0778 800 FunFam Eukaryotic translation initiation factor isoform 4G-2 214 450 - -
Glsi13g0778 800 SUPERFAMILY ARM repeat 217 452 IPR016024 -
Glsi13g0778 800 MobiDBLite consensus disorder prediction 114 129 - -
Glsi13g0778 800 MobiDBLite consensus disorder prediction 27 41 - -
Glsi13g0778 800 MobiDBLite consensus disorder prediction 594 608 - -
Glsi13g0778 800 SUPERFAMILY ARM repeat 629 783 IPR016024 -
Glsi13g0778 800 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 59 784 IPR045208 GO:0003743
Glsi13g0778 800 FunFam Eukaryotic translation initiation factor isoform 4G-2 629 790 - -
Glsi13g0778 800 Pfam MA3 domain 636 748 IPR003891 -
Glsi13g0778 800 Gene3D - 214 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0778 Glsi-ChrGlsi13 26547309 26553096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0778 1 798 Eukaryotic Initiation Factors Gene Family AT5G57870 66.833 0.0 998