Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0769 ATGAAGGAGGTAGCAGAGGCGTTTCTGGGTCAAGCAGTGAAGAACGCTGTGATTACTGTCCCTGCTTATTTCAACGATTCCCAGAGACAAGCCACTAAGGATGCAGGGGCAATCTCTGGTTTGAACGTGCTTCGAATTTTCAACGAGCCTACTGCTGCTGCTATAGCTTATGGGTTGGACAAGAAGGCTTCGAGAAAAGGTGAGCAGAATGTGCTCATATTCGATCTGGGTGGTGGGACTTTTGATGTTTCCTTGTTAACGATTGAAGAAGGGATTTTTGAGGTTAAGGCTACGGCTGGTGATACCCATCTGGGAGGTGAAGATTTTGATAATAGGATGGTGGATCACTTTGTGGCTGAGTTCAGGAGAAAGAACAAGAAGGATATCAGTAGAAATGCCAAAGCTTTGAGGAAATTAAGAACAGCATGCGAGAGAGCTAAGAGGCTTCTGTCTTCGACAGCGCAGACAATGATAGAAGTCGATTCCTTGTACGAAGGAATAGATTTCTATGCGACAATTACGAGGGCAAGGTTCGAGAAATTGAACATGGATTTGTTCAGAAAGTGCATGGAGCCAGTAGAGAAGTGTCTCCGGGATGCAAAAATAGACAATGACCAGGTTCACGAGGTTGTTCTGGTTGGTGGATCAACCAGAATCCCAAAGGTTCAGCAACTTTTGCAGGATTTCTTCAATGGCAAAGAGCTCTGCAAGAGCATCAACCCAGATGAAGCCGTGGCTTATGGAGCAGCAGTTCAAGCTGCCGTCTTGAGCGATGCTGATGGGATTCTAAATGTCGCTGCTGAAGATGAAACAGCAGGGGTAAAGAACAAGATAACAATAACGAACGACAAGGGGAGGTTGAGCAAGGAAGAGATAGAGAAGATGGTGAAAGATGCAGAAAGATACAAGGCAGAGGATGAGGAGGCAAAGAGGAAGGTGGAGGCGAAGAACTCACTTGAGAATTACGCCTACAATATGAATAGCACTATAAAGGATGAGGAGATTGGAGGGAAACTGAGGCCAGATGAGAAGCAGAAGATTGAGAAGGCAGTGGAAGAGACTATAGAGTGGCTAGAGGGGAACCAGTTGGCTGAAGTGGACGAGTTTGAGGATAAGCAGAAGGAGCTTGAAGGAATCTGCAATCCCATCATATTCATGGCTAAGTTCAGGGTGGGGTGCTCGTGTTGA 1188 0.4604 MKEVAEAFLGQAVKNAVITVPAYFNDSQRQATKDAGAISGLNVLRIFNEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDHFVAEFRRKNKKDISRNAKALRKLRTACERAKRLLSSTAQTMIEVDSLYEGIDFYATITRARFEKLNMDLFRKCMEPVEKCLRDAKIDNDQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAVLSDADGILNVAAEDETAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEAKRKVEAKNSLENYAYNMNSTIKDEEIGGKLRPDEKQKIEKAVEETIEWLEGNQLAEVDEFEDKQKELEGICNPIIFMAKFRVGCSC 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0769 395 Gene3D - 62 236 - -
Glsi13g0769 395 ProSitePatterns Heat shock hsp70 proteins family signature 3. 210 224 IPR018181 -
Glsi13g0769 395 FunFam Heat shock 70 kDa 105 188 - -
Glsi13g0769 395 Gene3D Actin; Chain A, domain 4 106 188 - -
Glsi13g0769 395 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Glsi13g0769 395 PRINTS 70kDa heat shock protein signature 79 89 - -
Glsi13g0769 395 PRINTS 70kDa heat shock protein signature 239 259 - -
Glsi13g0769 395 PRINTS 70kDa heat shock protein signature 207 223 - -
Glsi13g0769 395 PRINTS 70kDa heat shock protein signature 16 36 - -
Glsi13g0769 395 FunFam Heat shock protein 70 317 389 - -
Glsi13g0769 395 SUPERFAMILY Actin-like ATPase domain 66 257 IPR043129 -
Glsi13g0769 395 FunFam Endoplasmic reticulum chaperone BiP 1 68 - -
Glsi13g0769 395 Gene3D - 1 254 - -
Glsi13g0769 395 PANTHER HEAT SHOCK PROTEIN 70KDA 258 354 IPR013126 GO:0005524|GO:0140662
Glsi13g0769 395 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 314 385 IPR029048 -
Glsi13g0769 395 ProSitePatterns Heat shock hsp70 proteins family signature 2. 73 86 IPR018181 -
Glsi13g0769 395 FunFam Heat shock 70 kDa protein 69 132 - -
Glsi13g0769 395 Gene3D - 287 388 IPR029048 -
Glsi13g0769 395 Pfam Hsp70 protein 1 257 IPR013126 GO:0005524|GO:0140662
Glsi13g0769 395 Pfam Hsp70 protein 258 384 IPR013126 GO:0005524|GO:0140662
Glsi13g0769 395 FunFam Heat shock cognate 70 kDa protein 2 189 236 - -
Glsi13g0769 395 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 257 320 IPR029047 -
Glsi13g0769 395 Coils Coil 289 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0769 Glsi-ChrGlsi13 26484405 26485889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0769 1 384 Calmodulin-binding Proteins AT5G02500 74.740 0.0 588