Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0765 ATGGCTTTGTTTAGATTTTCAATGTTTCTGTTTCTCCGCTTGGTCATTGTTCTTCAGTTTGGTGGAGTTTCTGGGGAAGAAAATGGCCACCTTGTGAATGATAAAAGTTCACTGATTGTATTCATGTCAGGGATTGTTTCGGACCCAGAAAACGCTTTAGAGAGTTGGAAATCTCCCGGTGTTCATGTCTGTAATTGGTCAGGCATCACATGCAACAATGTAAGTAACAGAATCATAGAGCTTAATCTTAGTGGAAGCTCACTAGGAGGTGCCATTTCTCCTGCTCTTGCTAACCTCTCTTCTCTGAAAATTCTTGATCTTTCTATGAATTTTTTTGTGGGTCACATTCCAAAAGAGTTGGGATATTTAGTTCGGCTTGGAGAACTCTGTTTATCTTGGAATCTTCTTGAAGGGAAAATCCCCTCAGAGTTGGGTTCACTTCACAACTTATACTACTTTGACATAGGAAGTAATAAGCTTGAGGGTGAGATTCCACCATCACTTTTCTGCAATTTGTCATCTTCATTGAGGTACATCGACCTCACTAACAATTCCTTAGGGGGACAAATCCCCCTGAACAATGAGTGTATACTTTATGAGCTTAGGTTCCTATTACTTTGGTCTAACCAGCTTGTAGGCCAAGTTCCTTTAGCTCTTTCAAACTCCACACAGCTTAAATGGCTCGATTTGGAGTCCAATATGTTGAGTGGAGAGCTACCATCTGAGATTTTAGGTAATTGGCCACAATTACAATACCTCTACTTATCCTATAATGACTTTGTCAGCCATAATGGTAACACCAACCTTGAACCTTTCTTTGCTTCCTTGGTGAATTTGTCTAACTTCCAAGAACTCGAATTGGCCGGGAACAATCTTGGTGGGAAGCTACCTCGTATAATTGGAGATCTTCCCACCAATTTGAAACAGCTTCACCTAGATGACAATCTCATATATGGCTCCATTCCCCTACACATTGGCAATCTTGTGAATCTGACTCTATTAAATTTGTCCAGCAACCAACTAAATGGATCAATCCCTCCCAGCCTATGCCAGATGGGTAGGCTTGAGAGAGTTTATTTGTCAAATAATTCACTATCTAGTGAGATTCCTTCAGCCCTTGGTCAGATTAAGCATCTGGGTCTCCTAGATTTGTCAAGAAACAAACTTTCTGGTTCAATACCAGATAGTTTTTCCAATCTTTCCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGAACAATACCACCTACCCTGGGAGAATGTGTCAATCTGGAGATTTTAGACCTATCTCACAACAAAATTTCAGGGGTGATTCCTACAGAAGTTGCAGCCTTAACTAGCTTGACATTATACTTGAATCTATCAAGCAATAACTTAGATGGGCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTTGCTATTGATCTATCCATGAACAATCTCTCTGGTAGAATCCCACCACAGCTTGAAAGTTGCATAGCACTTGAGTACCTTAACCTTTCAGGTAACTTCTTAGAAGGCCCTCTGCCATATTCAGTAGGCCAATTGCCTTATATTCGAGCACTTGATGTGTCGTCAAATCAATTGATTGGGGAAATACCTGAATCCGTGCAGTTATCTTCCACTCTCAAGCAACTTAATTTCTCTTTCAACAGATTCTCAGGGAATATATCAAATAAGGGAGCATTTTCATCTCTCACCATAGACTCTTTCCGAGGAAATGATGGTCTTTGTGGCTCAATAAAAGGCTTGCAAAGGTGCCATAAGAAACGCAGCTATGATTCGATTCTCTTGCTAATTCTAGTGTTACTCTTTGGCACCCCCATGTTGTGCATGTTTGGGCTCAAATTGGGCATTCTTAGAAAAGGGAACCTGCAAGATGATGAAGAGGAAACAAAAGAGCTCAACTACCCAAGAATCTCATATAGGCAACTTGTTGAAGCCACTGGGGGCTTCAATGCTTCAAGCTTAATCGGTTCAGGCCAGTTTGGGCAGGTCTACAAAGGAGTCCTCAGAGATAACACAAGAATAGCAGTGAAAGTATTAGATACTACCACAGCTAGTGATATTTCTAGGAGCTTCAAAAGGGAATGCCAGATTCTGAAGAGGACTAGGCACAGAAATTTAATAAGGATAATCACTATTTGCAGTAAGCCAGAGTTTAAGGCTCTTGTTCTTCCACTGATGCCAAAGGGTAGCCTAGAGAGGCACCTCTATCCGAGCCCTGGGTTGAGCCAGACGTTGGATTTGGTTCAGTTAGTGAGAATCTGCAGCGATGTGGCTGAGGGAATGGCCTATCTGCACCATTACTCTCCAGTTAGAGTAGTACATTGTGATCTCAAGCCAAGCAATATACTTCTTGATGACGATATGACAGCTTTGGTAACTGATTTTGGAATTGCAAGGCTTGTAAAAGGTGATGAGAGTATGTCTACCAATAACTCAGCTTCTTTCAGTTCAACTCATGGCTTGTTATGTGGCTCTATTGGCTATATAGCCCCTGAGTATGGAATGGGGAAACATGCCTCAACTCAAGGTGATGTTTACAGTTTTGGAGTACTTTTGCTAGAAATTGTGACAGGAAGGCGCCCCACAGATGTTCTTGTCCATGAAGGTTCTAGCTTGCATGAGTGGGTAAAGAGACAATATCCACACAAGCTTGAAAGCATCCTTAAACAAGCATTTGAAAGGTGCTTTCCTTTAGGAATTCCAGTGCATAATAACAAAATATGGCAAGAAGTTTTAATGGAGCTGATAGAGTTGGGGCTCATGTGCACACAACACAATCCTTCAACAAGACCAAGCATGTTGGATTTAGCTCAAGAGATGGGGAGGTTAAAAGACTACCTGGCTAATCCATCTCCTCTTATGATTGAAGAAGTCAATCCCAAGGATGATTCTTTCTGCAGCAAAGATAACTTAGTTGGCAAATAA 2949 0.413 MALFRFSMFLFLRLVIVLQFGGVSGEENGHLVNDKSSLIVFMSGIVSDPENALESWKSPGVHVCNWSGITCNNVSNRIIELNLSGSSLGGAISPALANLSSLKILDLSMNFFVGHIPKELGYLVRLGELCLSWNLLEGKIPSELGSLHNLYYFDIGSNKLEGEIPPSLFCNLSSSLRYIDLTNNSLGGQIPLNNECILYELRFLLLWSNQLVGQVPLALSNSTQLKWLDLESNMLSGELPSEILGNWPQLQYLYLSYNDFVSHNGNTNLEPFFASLVNLSNFQELELAGNNLGGKLPRIIGDLPTNLKQLHLDDNLIYGSIPLHIGNLVNLTLLNLSSNQLNGSIPPSLCQMGRLERVYLSNNSLSSEIPSALGQIKHLGLLDLSRNKLSGSIPDSFSNLSQLRRLLLYDNQLSGTIPPTLGECVNLEILDLSHNKISGVIPTEVAALTSLTLYLNLSSNNLDGPLPLELSKMDMVLAIDLSMNNLSGRIPPQLESCIALEYLNLSGNFLEGPLPYSVGQLPYIRALDVSSNQLIGEIPESVQLSSTLKQLNFSFNRFSGNISNKGAFSSLTIDSFRGNDGLCGSIKGLQRCHKKRSYDSILLLILVLLFGTPMLCMFGLKLGILRKGNLQDDEEETKELNYPRISYRQLVEATGGFNASSLIGSGQFGQVYKGVLRDNTRIAVKVLDTTTASDISRSFKRECQILKRTRHRNLIRIITICSKPEFKALVLPLMPKGSLERHLYPSPGLSQTLDLVQLVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDMTALVTDFGIARLVKGDESMSTNNSASFSSTHGLLCGSIGYIAPEYGMGKHASTQGDVYSFGVLLLEIVTGRRPTDVLVHEGSSLHEWVKRQYPHKLESILKQAFERCFPLGIPVHNNKIWQEVLMELIELGLMCTQHNPSTRPSMLDLAQEMGRLKDYLANPSPLMIEEVNPKDDSFCSKDNLVGK 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0765 982 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 734 959 - -
Glsi13g0765 982 Gene3D Ribonuclease Inhibitor 198 262 IPR032675 -
Glsi13g0765 982 SMART LRR_typ_2 425 448 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 223 246 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 147 171 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 400 424 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 376 399 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 99 123 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 198 222 IPR003591 -
Glsi13g0765 982 SMART LRR_typ_2 328 352 IPR003591 -
Glsi13g0765 982 SUPERFAMILY Protein kinase-like (PK-like) 638 946 IPR011009 -
Glsi13g0765 982 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 637 733 - -
Glsi13g0765 982 ProSitePatterns Protein kinases ATP-binding region signature. 663 685 IPR017441 GO:0005524
Glsi13g0765 982 SUPERFAMILY L domain-like 42 263 - -
Glsi13g0765 982 Gene3D Transferase(Phosphotransferase) domain 1 734 960 - -
Glsi13g0765 982 Pfam Protein kinase domain 659 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0765 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 346 947 - -
Glsi13g0765 982 Gene3D Ribonuclease Inhibitor 263 600 IPR032675 -
Glsi13g0765 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Glsi13g0765 982 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 203 598 - -
Glsi13g0765 982 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Glsi13g0765 982 SMART LRR_sd22_2 147 174 - -
Glsi13g0765 982 SMART LRR_sd22_2 424 445 - -
Glsi13g0765 982 SMART LRR_sd22_2 279 305 - -
Glsi13g0765 982 SMART LRR_sd22_2 123 146 - -
Glsi13g0765 982 SMART LRR_sd22_2 376 402 - -
Glsi13g0765 982 Pfam Leucine rich repeat 354 413 IPR001611 GO:0005515
Glsi13g0765 982 SMART serkin_6 657 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0765 982 ProSiteProfiles Protein kinase domain profile. 657 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0765 982 CDD STKc_IRAK 663 951 - -
Glsi13g0765 982 SUPERFAMILY L domain-like 326 584 - -
Glsi13g0765 982 FunFam Leucine-rich repeat receptor-like protein kinase 31 192 - -
Glsi13g0765 982 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Glsi13g0765 982 ProSiteProfiles Leucine-rich repeat profile. 426 447 IPR001611 GO:0005515
Glsi13g0765 982 Pfam Leucine Rich Repeat 500 518 IPR001611 GO:0005515
Glsi13g0765 982 Gene3D Phosphorylase Kinase; domain 1 628 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0765 Glsi-ChrGlsi13 26458459 26461813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0765 34 953 Receptor kinase-like Gene Family AT3G47110 35.610 9.03e-158 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi13g0765 Pkinase 1e-44 CL0016