Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0762 ATGAAACGGCTGCCGAAACCCTGTTTGTTCGGTGCAAAGGATATATGCCAAATTATTCTCCATAACAACATTGTGGGGCACTTATCTAAACATGATCCTCGAACGGGTGGTTCCGGATTATTCTTGAGGGCTGATAGGGAAAGGGGTTACCATCAAGAGCCATTGGCATTCGCACTGGAACTTGCAATACGGAATTGCGATGTTTCCCCCTCTAAAGGGCGGCAACTCCTGGAAGAAGAGGACCGCTCGTTGAAACGAAACCATGAATGCTTACGTGGCAACTCATTAGCGGATCATGAACTGAGGAGGCACCAAACCCCCTTCATGCCTGAGTGGTTACAGAAAATCGTAATATTATCCACACGCCTTTCAATACTTATTGAAGTGCCGACCAATGAGTATATTAAAAGATTCAACAGCCCCTCCACGGAAATGGAACCTAGGTCCTCTTTGGTCGTTCAAATTCTGGCCATTGTGGCCATTCTTCTTTTGGGGAATACTAGTTTTGCAACATCTTCCTCGAACCCATTTGTCCAACAAAAGCTGGACAGGGTTCGTAGCCTGCCGGGTCAAACATTTAACATCACCTTTGCACACTATGCTGGGTATGTCACGGTCAACGAGGAAGCCGGGAGAGCACTATTTTACTGGTTCATTGAGGCAGCGGAAGACCCCGATACAAAACCTCTCATTCTATGGCTCAATGGAGGACCTGGATGTTCTTCCATCGCTTACGGGGAGGCAGAGGAAATTGGCCCCTTTCACATTAAGCCAGATGGCGAGACCCTTTATCTAAATCCCTACTCTTGGAATAATGTTGCCAACCTTCTTTTTATTGATTCTCCTGTTGGAGTTGGGTTTTCGTATTCAAACAGTACTTCTGATATACTGAGCAATGGTGATAAGAGGACTGCTAAGGACTCTTTGACATTCCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAGGAAGAGACCTTTTAATCACTGGTGAGAGCTACGCAGGGCATTATGTTCCTCAACTTAGCCAAGCTATTGTGAAGTACAACTGGATAGCCAAAGAAAAAGTTATAAATCTGAAAGGTTACATGGTAGGAAATGCTCTAACTGATGATTACCATGATCACGTTGGGCTTTTCCAGTTTTTGTGGTCATCTGGTTTGATTTCTGATCAAACATACCAGCAATTGAACATTCAATGTGATTTCCAGTCTTTCATACATCCCTCAATATCATGTGAAAAATTTTTAGAAATTGCTGATAGAGAAATTGGCAACATTGATCAATACAGTATCTTCACCCCTCCATGCACTGCTAATGTTAGCCAGTCAAACCAGCTGGTGAAAAGAAAGCATTTGGTTGGCAGACTCAATAAGGGGTATGATCCTTGCACCGAGAAGCACTCTGCTGTATACTTCAATCTACCTGAGGTTCAAAAGGCTCTTCATGTTGATCCAGATCATAAGCCTGCTAAATGGGAGACCTGCAGTGAAGAGATATATAACAACTGGAAGGATTCTCCATTGACAGTGCTCGATATTTATTATGAACTTATTCACTTAGGACTGCGAATATGGATGTTCAGTGGTAATACAGATGCAGTAATCCCAGTGACATCCACTCGCCTAAGTATAGATGCTCTAAAGCTTCCAACTGTGAGCCCATGGCGTCCCTGGTATGATGATGGGAAGGTGGGAGGATGGACCCAGGAATATGCTGGACTCACCTTTGTAACAGTGAGGGGAGCAGGGCATGAAGTTCCTCTACATAGACCAAAACTTGCTCTTGCACTCATCAAAGCCTTCGTAGCTGGATCTTCCATGCCCTACCGAGAGGAGATAAAGTAA 1848 0.441 MKRLPKPCLFGAKDICQIILHNNIVGHLSKHDPRTGGSGLFLRADRERGYHQEPLAFALELAIRNCDVSPSKGRQLLEEEDRSLKRNHECLRGNSLADHELRRHQTPFMPEWLQKIVILSTRLSILIEVPTNEYIKRFNSPSTEMEPRSSLVVQILAIVAILLLGNTSFATSSSNPFVQQKLDRVRSLPGQTFNITFAHYAGYVTVNEEAGRALFYWFIEAAEDPDTKPLILWLNGGPGCSSIAYGEAEEIGPFHIKPDGETLYLNPYSWNNVANLLFIDSPVGVGFSYSNSTSDILSNGDKRTAKDSLTFLLKWFERFPQYKGRDLLITGESYAGHYVPQLSQAIVKYNWIAKEKVINLKGYMVGNALTDDYHDHVGLFQFLWSSGLISDQTYQQLNIQCDFQSFIHPSISCEKFLEIADREIGNIDQYSIFTPPCTANVSQSNQLVKRKHLVGRLNKGYDPCTEKHSAVYFNLPEVQKALHVDPDHKPAKWETCSEEIYNNWKDSPLTVLDIYYELIHLGLRIWMFSGNTDAVIPVTSTRLSIDALKLPTVSPWRPWYDDGKVGGWTQEYAGLTFVTVRGAGHEVPLHRPKLALALIKAFVAGSSMPYREEIK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0762 615 FunFam Carboxypeptidase 180 439 - -
Glsi13g0762 615 PRINTS Carboxypeptidase C serine protease (S10) family signature 315 340 IPR001563 GO:0004185|GO:0006508
Glsi13g0762 615 PRINTS Carboxypeptidase C serine protease (S10) family signature 266 278 IPR001563 GO:0004185|GO:0006508
Glsi13g0762 615 PRINTS Carboxypeptidase C serine protease (S10) family signature 575 588 IPR001563 GO:0004185|GO:0006508
Glsi13g0762 615 PRINTS Carboxypeptidase C serine protease (S10) family signature 279 289 IPR001563 GO:0004185|GO:0006508
Glsi13g0762 615 FunFam Carboxypeptidase 511 605 - -
Glsi13g0762 615 ProSitePatterns Serine carboxypeptidases, serine active site. 329 336 IPR018202 GO:0004185
Glsi13g0762 615 Gene3D - 464 502 - -
Glsi13g0762 615 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 184 592 IPR001563 GO:0004185|GO:0006508
Glsi13g0762 615 Gene3D - 511 605 - -
Glsi13g0762 615 ProSitePatterns Serine carboxypeptidases, histidine active site. 575 592 IPR033124 GO:0004185
Glsi13g0762 615 Gene3D alpha/beta hydrolase 180 439 IPR029058 -
Glsi13g0762 615 SUPERFAMILY alpha/beta-Hydrolases 183 608 IPR029058 -
Glsi13g0762 615 FunFam Carboxypeptidase 460 608 - -
Glsi13g0762 615 Pfam Serine carboxypeptidase 189 604 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0762 Glsi-ChrGlsi13 26428110 26437157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0762 474 608 Calmodulin-binding Proteins AT2G22960 25.000 6.40e-11 60.1