Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0754 ATGAACTTCAGTACTGTACGAGGATCATTTATAAATGGGGCTTCTTCTGTTAGGTATGGGCCTCATTTGGGCCTTGCTAGAAGGCTAGGTTTAAGGCACCGGTGGACAGGCCGATATGAAGCTCATTTGTGGGACAAAAACTGCTGGAATGAGTCCCAAAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGAGGTTGCAGCACATGCTTACGATCTAGCAGCATTGAAATACTGGGGTCAAGAAACCATTCTTAACTTTCCGTTACCGACCTACCTGAACGAACTGAAAGAAATGGAGGGACAATCAAGGGAAGAGTATATTGGATCAATAAGGAGGAAAAGCAGTGGTTTTTCTCGGGGAGTTTCAAAATACAGAGCTACCCAAGAAGAAGCTGCCACAGCATATGATATGGCGGCGATTGAATACCGTGGGGTTAACGCCGTCACTAATTTCGACCTTAGCCGTTATGTTAAGTGGCTTAAGCCCAATAATAATGATATCAACATGATTAACACTGATCTTAGTGAGTCTAACCCTAACTCTGACAAAACCAACTTCACCCCAAACCCTAATCAAGAACAAGGATTCAACTTATTCCACCACCCGGAATCATTCACAAGTGGAGAAGAAACTACCTTGACTCAACCGCGGGTAACAACTGCTACGTCAGCTCTAGGGCTTCTACTTCAGTCGTCTAAGTTCAAGGAAATGATGGAAATGACATCGGCCGTTGATTTGTCGGTGGTGCCTCTGCCGGATATGGAGTCTGAGTTGCAGGCGTGCAAGTTTCCCAATGACATTCAGACCTACTTCGAGTGTGAAAACTCCAATGGATATGGGGAAGGGGATGATACCATGTTCAGCGAGCTCAACTCCTTTGTTCCCCCCTACTTTCCACTATGA 909 0.451 MNFSTVRGSFINGASSVRYGPHLGLARRLGLRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEVAAHAYDLAALKYWGQETILNFPLPTYLNELKEMEGQSREEYIGSIRRKSSGFSRGVSKYRATQEEAATAYDMAAIEYRGVNAVTNFDLSRYVKWLKPNNNDINMINTDLSESNPNSDKTNFTPNPNQEQGFNLFHHPESFTSGEETTLTQPRVTTATSALGLLLQSSKFKEMMEMTSAVDLSVVPLPDMESELQACKFPNDIQTYFECENSNGYGEGDDTMFSELNSFVPPYFPL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0754 302 ProSiteProfiles AP2/ERF domain profile. 21 89 IPR001471 GO:0003700|GO:0006355
Glsi13g0754 302 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 208 - -
Glsi13g0754 302 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Glsi13g0754 302 SMART rav1_2 107 160 IPR001471 GO:0003700|GO:0006355
Glsi13g0754 302 Gene3D AP2/ERF domain 28 90 IPR036955 GO:0003700|GO:0006355
Glsi13g0754 302 Gene3D AP2/ERF domain 103 156 IPR036955 GO:0003700|GO:0006355
Glsi13g0754 302 SUPERFAMILY DNA-binding domain 128 156 IPR016177 GO:0003677
Glsi13g0754 302 SUPERFAMILY DNA-binding domain 30 90 IPR016177 GO:0003677
Glsi13g0754 302 CDD AP2 32 89 IPR001471 GO:0003700|GO:0006355
Glsi13g0754 302 ProSiteProfiles AP2/ERF domain profile. 78 154 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0754 Glsi-ChrGlsi13 26377210 26381445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0754 32 186 AP2-EREBP Transcription Factor Family AT5G57390 50.000 6.14e-53 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1335 02 10176446 10179708 Glsi13g0754 13 26377210 26381445 CCT