Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0713 ATGAATCTAACCAAATACATCCTATTATCTTTCATTGTTGACTCCCAGCTTCAAGAAGTTCTGTTGTTTGGGGCAGCTGATGATCCTATTCCTCTTCTGGGTGGGAAGAAGTTGATAATTGGTGTGCCTAAGAAATCTGGTTTTACCGAGTTTGTGGATGCAAAACTTAGTTCTACTAATAAGACCCAGATGGTCGAGCTTAGTGGTTACTCCGTAGATGTTTTCAGGGCTACAGTAGCTCATCTGCGCAGTTTGGATCACAACATTTCTTTTGAGTTTAGACCCTTCGTAGACGAATATGGAAACAGTAAAGGGTCTTACGATCAACTCCTAGAACAGATTTCTGCAAAAAAGAAGTATGATGCTGTGGTGGGAGACGTGACGATTGTGGCAAATCGATCATCCTACGTAGATTTTACATTACCATATGCAGAGTCTGGTGTGGAGATACTTGTTAAACTTCGACAAAATGGACACTTGAATATGTGGATTTTTCTACGACCTTTTAGTTGGGATCTTTGGTTGTTCATCACTGCTTTCTGTATTTTTATAGGAGGTAGTATAAGGTTCATGGAACGTAACGTAAACAGAGATGTGGGATCTGAAAATTCACAAAGTAGGGATCAGTTTTCCAGGGTATCAAGCTTGTTGCTTCCTTTGACACAAGTGGTCCTTCCTGAAAGTAAATCTTAA 693 0.3997 MNLTKYILLSFIVDSQLQEVLLFGAADDPIPLLGGKKLIIGVPKKSGFTEFVDAKLSSTNKTQMVELSGYSVDVFRATVAHLRSLDHNISFEFRPFVDEYGNSKGSYDQLLEQISAKKKYDAVVGDVTIVANRSSYVDFTLPYAESGVEILVKLRQNGHLNMWIFLRPFSWDLWLFITAFCIFIGGSIRFMERNVNRDVGSENSQSRDQFSRVSSLLLPLTQVVLPESKS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0713 230 Gene3D - 32 162 - -
Glsi13g0713 230 Pfam Ligated ion channel L-glutamate- and glycine-binding site 59 154 IPR019594 GO:0004970|GO:0016020
Glsi13g0713 230 SUPERFAMILY Periplasmic binding protein-like II 23 178 - -
Glsi13g0713 230 Gene3D - 163 225 - -
Glsi13g0713 230 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 201 IPR015683 -
Glsi13g0713 230 FunFam Glutamate receptor 34 160 - -
Glsi13g0713 230 SMART GluR_14 37 230 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0713 Glsi-ChrGlsi13 25873882 25874885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0713 35 198 Ion Channels AT2G29120 44.512 1.30e-35 131