Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0706 ATGGAACAGAACAAGTTTAAAAGAACATCCGAGGATTCCTTGTACGTTCATAAGGGGAACCCCCCTGATAGGAAGTCAGATATTAGGGTTTGGCTGGGTGAAAGTTCTACTAATAAGACCCAGTTGGTCCAGCTTACTGGCTTTTCCATTGATGTTTTCGATGCTGCTATAGTTTATCTTCAACGTTTAGGTTACACTATTTCCGTTGAGTTTCAAGCTTTCGTAAACGAATCTGGAAACAGTGCTGGGACTTACGACATACTACTCGATCAGATTCCTGATAAGTACGACGCTGTGGTGGGAGATGTCACAATTGTGGCTAATCGATCAAACTACGTAGATTTTACACTACCATATGCAGAGTCTGGCGTGCAGATGCTTGTAAAAGTTCGACATGATCGACACTTAAATATGTGGATTTTTCTGGCACCTTTTAGTTGGGATCTCTGGTTGTCCATCGTCATTTTCTGTATTTTTATAGGAGCTACTATACGGTTCATGGAACGTAATGTAAACAGAGAAGCAGAGTTTGAAAATTCACCGCGTAGGGAACAGCTTGCAAGACTATCAATATTGTGGCTTCCTTTGGCACAAGTGGTCCTTCCTGAAAGTAAATCTTAA 621 0.4122 MEQNKFKRTSEDSLYVHKGNPPDRKSDIRVWLGESSTNKTQLVQLTGFSIDVFDAAIVYLQRLGYTISVEFQAFVNESGNSAGTYDILLDQIPDKYDAVVGDVTIVANRSNYVDFTLPYAESGVQMLVKVRHDRHLNMWIFLAPFSWDLWLSIVIFCIFIGATIRFMERNVNREAEFENSPRREQLARLSILWLPLAQVVLPESKS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0706 206 MobiDBLite consensus disorder prediction 1 21 - -
Glsi13g0706 206 Pfam Ligated ion channel L-glutamate- and glycine-binding site 38 130 IPR019594 GO:0004970|GO:0016020
Glsi13g0706 206 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 194 IPR015683 -
Glsi13g0706 206 Gene3D - 26 138 - -
Glsi13g0706 206 SUPERFAMILY Periplasmic binding protein-like II 44 154 - -
Glsi13g0706 206 Gene3D - 139 200 - -
Glsi13g0706 206 SMART GluR_14 27 206 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0706 Glsi-ChrGlsi13 25768032 25770331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0706 46 184 Ion Channels AT2G29120 43.571 4.92e-29 111