Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0704 ATGGATAAGTTCTTGGCGAGCCTTTTCTTACTTCTTCTGCTACAGATACAAACTGGTAATGCGTCAAGTGCCGCAGTGACCAAAATGAGAATAGGGGTTCCTAAGAAAGATGGTTTCGCTCAGTTCGTGAAAGTGAGTTGGGATCCTCATGAAAAGAAGTACAATGTCTCTGGATATTGCATAGATGTTTTCAATGCCGTAATAAAGCTCTTGCCTTTCAATGTTTCTCCTGAATTTGAACCTTATGTTGACCAAACTGGACAGAGTGCAGGCACATACGATTCACTTGTTCAACAGATCCCAGACAAGTATGATGCAGTGGTTGGAGATATAACAATAGTGGCCAACCGTACAAAGTTTGTAGATTTTACGCTGCCCTACACAGAGTCAGGAGTATCAATGCTGGTGAAAGTTCAACATGGGAGGCACCTAACCATGTGGATTTTTGTGAAACCTTTCAGCTGGGATCTGTGGCTCAGCATAGTCATTGTCTCTATCTTCATTGGCTTCGTCATACTCATCATGGAACGAAACGTCAGTAGTCTGCCGCACAACAATGGATCCCAAACTCAGAAACAGCTCAACATGGTATCCATCTTATGGTTCCCATTAGCTCAGGCTGTGATCCCTGAAAGTAAGTCTACAATTCACTCCTTTAGATAA 663 0.4268 MDKFLASLFLLLLLQIQTGNASSAAVTKMRIGVPKKDGFAQFVKVSWDPHEKKYNVSGYCIDVFNAVIKLLPFNVSPEFEPYVDQTGQSAGTYDSLVQQIPDKYDAVVGDITIVANRTKFVDFTLPYTESGVSMLVKVQHGRHLTMWIFVKPFSWDLWLSIVIVSIFIGFVILIMERNVSSLPHNNGSQTQKQLNMVSILWFPLAQAVIPESKSTIHSFR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0704 220 Pfam Ligated ion channel L-glutamate- and glycine-binding site 51 139 IPR019594 GO:0004970|GO:0016020
Glsi13g0704 220 FunFam Glutamate receptor 2.7 24 145 - -
Glsi13g0704 220 Gene3D - 147 209 - -
Glsi13g0704 220 Gene3D - 22 146 - -
Glsi13g0704 220 SUPERFAMILY Periplasmic binding protein-like II 4 164 - -
Glsi13g0704 220 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 213 IPR015683 -
Glsi13g0704 220 SMART GluR_14 28 220 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0704 Glsi-ChrGlsi13 25723561 25725406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0704 28 216 Ion Channels AT2G29100 40.526 2.71e-40 144