Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0685 ATGGAGAACCATAATGGTTTTCTGAACAATCCTCCAGCTTCTTCTTTCTTTCCTGCTCGTGATCATCCAAACCAACCTTTCCTGCAGAGTTTTGCAAATAATAAAGTTACTCGCGTGCACACTTTTTCTGAGTTGATGTCTTCTTCTGAGAATCATGCTGGTGCTTTAGAACAGTATGCAGAAGAAGATAAAAAGTATCCAAAGGGAGGGGTAATAAATCGAAGTGCATTAAACGGATTTTGGAAGGCTACAGGACATTCAGCTGTGAAATCATCTACAGGTCACACAATTGGACATAAAAGAACATTGGTGTTTTATGATGGACGTGTCAAGACTAGATGGATCATGCAAGAATATAAATTTGCTAACTCTCCAAGGAGAATTGAGAATGGTCCAAATGATACGAGGCTTCAAGACTATGTTCTATGTATAATCTATAATAAAGAGAGGACAAAATCTGTCTCTGAATGGTCAGTTAACACTGGTGAGGAAGACTCCACAATGGAAAATAATCATAGTAACAGTTTTATGGATGTTACGTCACAACTGAATCAAAATATAGCTGCTCAGAACGGAGGGAAAATTCTAAACTTGGATGACCAAGTTCAAGCAAACACTGAGAACACACATCCTTTGCAATCTCAAGGTGTCACACCTGGGAATCAGCAAACATTGATAATATCTCCAAGAATTGACAATTCTTTAAAGAGACAAAATTCTGGTCCAAATTATATGAGGAATGTTCATGCTGGGTTTAGAGTTCCTGAAAATGTTCATGTTGGATTTAGTGTTTCTGAGATTGTTCGTGCTGGGTTTAGTGTTTGTGAAGATGTTGGTGTTGGGATTATTCAAACTGAAGATCCTTTAAAGAGACAAGAATATAATCCAAACGATGTGCAGTTTGGAAACTATGTTTTGTGGGAGCAGAAAGATGAACCTTGTTCTACAGTACCACCGCAGCCATTGGAACAGAACACCAACACCTACACCAATATAAATTCGTATGATGTTGTTGCTGAGAATGTTACGGATGCGCAAAATATTAGTACTGAGCATAGTGTTGCTGAGAATTTTACTGATTATCAGAATGTTAGTACTGAGTATACAGTTGCTGAGAACGTTGATCCTGGGATTCTCAGAAAAGATGGTATGATTGACGTTCCCCCAGACGAATACTTTAAATTGGATGGACTTTCATGGTTATCACAACTTGAAGAACAAGGGGAGTTTAATCTGCGCCTTAATGAGGACGATCAAGGGAATTACCTTTCGGATGTTCCAGATCAAGACGAGTTTGGTTTTTCCAATAATTTCTGGTCTAATTCGAATTTAATTGAGGACGTTTGTATATGA 1353 0.3806 MENHNGFLNNPPASSFFPARDHPNQPFLQSFANNKVTRVHTFSELMSSSENHAGALEQYAEEDKKYPKGGVINRSALNGFWKATGHSAVKSSTGHTIGHKRTLVFYDGRVKTRWIMQEYKFANSPRRIENGPNDTRLQDYVLCIIYNKERTKSVSEWSVNTGEEDSTMENNHSNSFMDVTSQLNQNIAAQNGGKILNLDDQVQANTENTHPLQSQGVTPGNQQTLIISPRIDNSLKRQNSGPNYMRNVHAGFRVPENVHVGFSVSEIVRAGFSVCEDVGVGIIQTEDPLKRQEYNPNDVQFGNYVLWEQKDEPCSTVPPQPLEQNTNTYTNINSYDVVAENVTDAQNISTEHSVAENFTDYQNVSTEYTVAENVDPGILRKDGMIDVPPDEYFKLDGLSWLSQLEEQGEFNLRLNEDDQGNYLSDVPDQDEFGFSNNFWSNSNLIEDVCI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0685 450 PANTHER NAC TRANSCRIPTION FACTOR 56 60 186 - -
Glsi13g0685 450 Pfam No apical meristem (NAM) protein 60 120 IPR003441 GO:0003677|GO:0006355
Glsi13g0685 450 SUPERFAMILY NAC domain 59 148 IPR036093 GO:0003677|GO:0006355
Glsi13g0685 450 Gene3D NAC domain 30 153 IPR036093 GO:0003677|GO:0006355
Glsi13g0685 450 MobiDBLite consensus disorder prediction 1 20 - -
Glsi13g0685 450 ProSiteProfiles NAC domain profile. 10 148 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0685 Glsi-ChrGlsi13 25593297 25595707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0685 59 217 NAC Transcription Factor Family AT5G63790 35.542 1.18e-21 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi13g0685 NAM 4.2e-09 No_clan