Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0679 ATGACCATGCTGGGTTTTGCACAAATAATTGTAGCACTTCTCTGCTTCCTTGTTCTTTTCCATCGGAGACGAGGCCGCAGAGACCCCCTCCTCACAGACTGGCCTATCTTAGGAATGTTACCGCAAGTTCTCTGTAACTTGGGGCAGATCCATGATTACGGGACTCAGGTGTTGAAAAGACACATGTGTACTGGGAATTTCACAGGACCTTGGTTAACCAACATGAACTACGTGGTTACCTGCGACCCCATGAACATACACCACGTGATGAGCAAGAATTTTGGTAACTACGTAAAGGGTTCTGACTTTTATGAGATTTTTGAAGCTTTTGGAGATGGGATTTTTAATGCAGACGCAGAGACATGGAAATACCATAGGACGCTACTCCATTCATTGTTTAAACACGGTAACTTCGAGATGTTTTTGGAGAAAATCATTCAAAAGAAGGTGAAGAGCTGCCTGCTTCCGCTTCTTGATCATGTACAAAGACAAGGAACCGAGGTGGATCTACAAGATGTTTTCAATCGGTTCAATTTTGACAACATTTGTTCCTTAGTTTTAGGATCTGACCCAAATTGTCTTGCAATTGATTTCCCGGAAGTTGCGTGTGAGAGGGCTTTTAATGAAGCGGAGGAGCATATTTTCTACAGACACACAGTGCCAAAAAGCATTTGGAAGCTACAGAAATGGCTTCAAATTGGAGCAGAGAAGAAGATGGCAGCGGCTTGTAAAATTTTCGACCAATTTTTATATGAATGTATAACATCAAAGCGGAAAGAACTAGACAAATTCAGCAAAAACGGAATGGAGGAAGCACGCGCTGACTTGTTGACAGCTTTAATGAGGGAGGAAGAAGGAAAGGAACAAGTGGATGACAAGTTTTTGAGGGACAGTGCTTTTAATCTTTTTATTGCAGGGAGAGACACAATAACTTCAGCTCTTTCTTGGTTTTTCTGGCTTGTTGCTACACATCCATCGGTGGAAGCTCAGATTCTTAAAGAGATCAAAGATAACATTGTTGCCAAAGAAGAAAATGTAATGATTTTAGGTGTGGAGGAGGTGAAAAATCTAGTTTACCTCCATGGTGCTATATGTGAAGCTCTGCGGCTATATCCTCCCATACCTTTTGAAATCAAGCAAGCAATCAAATCTGACATACTTCCAAGTGGCCATCATATTGATGCCAATGCTAAGATAATTTTCTCTTTCTATACAATGGGGAGACTTGAAGAAATATGGGGAAAAAATTGCTTAGAGTTCAGGCCAGAGAGATGGATCTCAGAGAGAGGACGAATTATTCACGTACCATCATACAAATTCATTAGTTTCAATGCAGGACCCAGGACTTGCTTGGGTAAGGACTTGTCCTTCATTCAAATGAAGATAGTGGCAACTGCTATATTGTGGAATTATCATATCCAGGTGGTGGAAGATCATCCTGTTTCCCCTGCCCTTTCAATTGTTCTTCTAATGAAACATGGGCTGAAAGTTAGGATGACCAAAAGAGTTTAA 1512 0.4114 MTMLGFAQIIVALLCFLVLFHRRRGRRDPLLTDWPILGMLPQVLCNLGQIHDYGTQVLKRHMCTGNFTGPWLTNMNYVVTCDPMNIHHVMSKNFGNYVKGSDFYEIFEAFGDGIFNADAETWKYHRTLLHSLFKHGNFEMFLEKIIQKKVKSCLLPLLDHVQRQGTEVDLQDVFNRFNFDNICSLVLGSDPNCLAIDFPEVACERAFNEAEEHIFYRHTVPKSIWKLQKWLQIGAEKKMAAACKIFDQFLYECITSKRKELDKFSKNGMEEARADLLTALMREEEGKEQVDDKFLRDSAFNLFIAGRDTITSALSWFFWLVATHPSVEAQILKEIKDNIVAKEENVMILGVEEVKNLVYLHGAICEALRLYPPIPFEIKQAIKSDILPSGHHIDANAKIIFSFYTMGRLEEIWGKNCLEFRPERWISERGRIIHVPSYKFISFNAGPRTCLGKDLSFIQMKIVATAILWNYHIQVVEDHPVSPALSIVLLMKHGLKVRMTKRV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0679 503 Gene3D Cytochrome P450 20 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 Pfam Cytochrome P450 31 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 CDD CYP86A 67 495 - -
Glsi13g0679 503 SUPERFAMILY Cytochrome P450 20 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PANTHER CYTOCHROME P450 18 497 - -
Glsi13g0679 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Glsi13g0679 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g0679 503 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0679 Glsi-ChrGlsi13 25553105 25554616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0679 1 502 Cytochrome P450 AT2G23180 45.614 4.37e-171 491