Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0666 ATGGATTCACTTTCCTTGTTGAATCTCGATGCAAGTTGGCGCACTTCTCTCGTGGGTCAGAATGAGAAAACATTAAAAGTTGCTGCAGGAGAGTGCTTGAAGGAAGCTGGCAATATTAAGAGATCATTCTCACAGCTCAGTTATGTCCTGGAAATGACCCGTATATTACAGTATCCTGAAACAGGTGCTAGGAAGGATACAGCCGTTCACCTTAGCTTTGTGCGGGAGCATGGCTTAGAATGGGCAGACAACAATATAGATGCGTACTTAGCTGCTGCTATTAAAGTTGGTCCTTGTAGCCTACGAGGATCTCGTATTGGAAATTATGTGGCTCAAGTTATACTTCCTCTAGCCCACACTTTTGAGCATGAAAAGTTTCTGGAAGTCAATAAATTGGAAGGAATTGCTCATTCTCCTAAAGACACAGTGGCACCAAGAGAGATGTTTCTTGTGCAATATCCAAAGGGATTTGGAAGGCCAATCGATCACGTTGGTAATCTGGGACATAATGCAGAAGAATGTAACCAGATTGATGCGAGTCATGAGGAGGATGATGATTATCAGGAACACCTCAAGTTGTGAAATCGTCCTAGTAGGAAGACAAATTGGATCATGCATGAATATAGGCTTGCTGACCCTTCACAAAGAATAAATGAGGATCTAAATGACATGAGGTGTGATGATTTTGTTGTATGTAAATTTTATAAAAGGAAAACAAAATCTGATCCTAAAAGGCGAAATGATATCGGTGAAAATAACGGCCTTATGACAGCAATGTTGCAGCCTAATGGTGTTGCCCAGATTGGTGGACAAATTCCAGATTTTGATTCAAATGATACGACGAATATTAATGCTGGAGACAGTGTTCTTGAAAATGATCCTGCTGGGTTTAGAGTTTCTGAGACTCTTCTTACTGGGCTTGAAATTCCTGAGACTGTTCGTGCTGGGTTTGGAGTTCCTGAAAATATTCATGTTGGGTTTAGAGCTCCTGAGAATGTTGGTTTTGGAATTACAACTGACAATACTCTAAAGAGACAAAAATATAATCCAAATGATATGCAGCTTGATGATTTTGTTCTATGTAAATTCTATCTAAGAACAACAAAATTTGACTCTGAAAGGCCAAATGATATTGGTGCGAATAATGGCCTTGAGAATGTTATGTCACTAATGTCGCATCCTAATGGTGTTGCTAAGAATGGTGGGGAAGGACAATTTAGGAGGAAAACCAAGAATGTCACGCTTAATACTCCAAAGAGACAAAAAAAATTGGTTCAAGAGCTTCGGATCGGTCAAAGTGGTCCCTCGCACGTCTATAATAATGGAACTTCGCCTCCTCACCCTGTGTTTCCCGAATTTGCCAGCCGCGTCGTCTATTCTGCAGAGGGCTTCCCCAGGACGAGGTTGTTGCAGACTGGATTATGCTTTGAAATGGCTCATTCCTCAAACTCCAAGATTCCAACTTTGAGCCTACGGCTGATGCCTGATGGCTCTTCCATTTTTTGTGGAAGTCCAGCATCTGTTCGACATACTTTCCCGTTTTCTTTGAGAAGACTCCATGGTCAATCTTCCACGGCGAACTATTCAAGCCTTTTCAGCTTTTCTTCTCCTCCAGCCACCATGCTTGAGGAATTAGTTAAGATGGAAGGCATGGCAGTTGGGGAAGATTTACTTCAAATGGAGTCAAAGCGATTTGGAAGGCTACAGGATCTCATTGGTGATCTAGAACATTATGCAGAAGAACGTAACCAGATTGATGCGAGTCATGAGGAGGAGCTCCTACGGCAGGATCAGTGCGCATTAGCCCTCCTAGTCTTCTCCATCGTCCGATCAGAGTATGAGGCAAATTTGTCTCTCTACATTGAGATGGTGCAGGCGCTCGCGAAGAATGGGATGACAGAGGATGTGGATCGTCTGATACTTGATTTGCAAGCAGAGAGTGGGATCGAGAGAGAAGCAGAGGCCGAGAGAGGGAGGAACACAACGAGAGAATGA 1995 0.4286 MDSLSLLNLDASWRTSLVGQNEKTLKVAAGECLKEAGNIKRSFSQLSYVLEMTRILQYPETGARKDTAVHLSFVREHGLEWADNNIDAYLAAAIKVGPCSLRGSRIGNYVAQVILPLAHTFEHEKFLEVNKLEGIAHSPKDTVAPREMFLVQYPKGFGRPIDHVGNLGHNAEECNQIDASHEEDDDYQEHLKLXNRPSRKTNWIMHEYRLADPSQRINEDLNDMRCDDFVVCKFYKRKTKSDPKRRNDIGENNGLMTAMLQPNGVAQIGGQIPDFDSNDTTNINAGDSVLENDPAGFRVSETLLTGLEIPETVRAGFGVPENIHVGFRAPENVGFGITTDNTLKRQKYNPNDMQLDDFVLCKFYLRTTKFDSERPNDIGANNGLENVMSLMSHPNGVAKNGGEGQFRRKTKNVTLNTPKRQKKLVQELRIGQSGPSHVYNNGTSPPHPVFPEFASRVVYSAEGFPRTRLLQTGLCFEMAHSSNSKIPTLSLRLMPDGSSIFCGSPASVRHTFPFSLRRLHGQSSTANYSSLFSFSSPPATMLEELVKMEGMAVGEDLLQMESKRFGRLQDLIGDLEHYAEERNQIDASHEEELLRQDQCALALLVFSIVRSEYEANLSLYIEMVQALAKNGMTEDVDRLILDLQAESGIEREAEAERGRNTTRE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0666 664 Gene3D NAC domain 183 242 IPR036093 GO:0003677|GO:0006355
Glsi13g0666 664 MobiDBLite consensus disorder prediction 267 288 - -
Glsi13g0666 664 MobiDBLite consensus disorder prediction 273 288 - -
Glsi13g0666 664 SUPERFAMILY NAC domain 196 237 IPR036093 GO:0003677|GO:0006355
Glsi13g0666 664 Gene3D Tetratricopeptide repeat domain 579 661 IPR011990 GO:0005515
Glsi13g0666 664 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 68 156 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0666 Glsi-ChrGlsi13 25419091 25441827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0666 68 157 Homeobox Transcription Factor Family AT1G52150 63.333 5.72e-31 127