Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0665 ATGCATTTAGGGGCAAAACCCACAAAGCCTCTGTTCTCCCCAAAGCATTTCACAAAGATCAACACAGACGCAGCTTATATAGAAAGAAAAGATCGAGATTACTCAGCTGTGGTGTGTCTAGGCCCGATAGGAGAGTTGCTCACAAGTTCAGCTAGGCAGGCAACACCCCTCTCTCCTCAGCGTGCAAAAATCTTAGCAATAAGAGACGCCATTCAGCTCGCGAGTAACCTGCAAATTGGAAAATTTGAGATAGTGCCAGATTGTAAAGAAGCCATTCACTCATTCAAGCATACACAGGAGAATCAAAGCACTGGGTGCCACTTGGATGTGGATCTATTAAAGGGGAATGAATCTATCTCCATGGCCTTGTGGCGTCATATCGATGCACTATTATGCTGCACAAAGAATGTGCCTCCAGCCGTTCACCTTAGCTTTGTGCGGGAGCATGGCTTAGAATGGGCAGACAACAATATAGATGCGTACTCAGCTGCTGCTATTAAAGTTGGCCCTTGTAGCCTACGAGGATCTCGTGTTGGAAATTATGTGGGTCAAGTCATACTTCCTCCAGCCCACACTATTGAGCATGAAAAGCATGCATTATGCTTCACGCTTTCAAAGATGGGTTTTTACTTGAAACAGAGATCAGAATTCAAAGTAGCGTGCCACTTGGATGTGGATCTATTAAAGGGGAATGAATCTATCTCCATGGCCTTGTGGCGTCATATCGATGCACTATTATGCTGCACAAAGAGCACTTCGCCAGGAGGCATGGAAGTTGAGGAAGATTTACTTCAAATGGAGCCAAAGCGATTTGGAAGGCTACAGGATCTCGTTAATGATCTAGAACATCATGCAGAAGAATGTAACCAGATTGATGCGAGTCATGCGGAGGTTGATGATTATCAGGCGCACCTCAAAAATGTTCAAGCCTATCGGGAATGCCTGCTTGATGATTTTGTTGTATGTAAACTCTATCTAAGGACAACAAATTCTGACTCTGAAAGGTCAAATGATATTGGTAAGAATAACGGCCTTCTAGATGCTGTGCCAATGTCGGGGCAGCCTAATGGTGTTGCCAAGAATGGTGGGCAAATTCCAAATTTTGAAGGACAACTTGAGAGGAACACCAAGGACGTCATGCTTAATACTCCAAAGAGACAAAAAATTGGTTCAAATGATATAATGCATAAATTTATATGTTGGTCCATATTTTGA 1215 0.4337 MHLGAKPTKPLFSPKHFTKINTDAAYIERKDRDYSAVVCLGPIGELLTSSARQATPLSPQRAKILAIRDAIQLASNLQIGKFEIVPDCKEAIHSFKHTQENQSTGCHLDVDLLKGNESISMALWRHIDALLCCTKNVPPAVHLSFVREHGLEWADNNIDAYSAAAIKVGPCSLRGSRVGNYVGQVILPPAHTIEHEKHALCFTLSKMGFYLKQRSEFKVACHLDVDLLKGNESISMALWRHIDALLCCTKSTSPGGMEVEEDLLQMEPKRFGRLQDLVNDLEHHAEECNQIDASHAEVDDYQAHLKNVQAYRECLLDDFVVCKLYLRTTNSDSERSNDIGKNNGLLDAVPMSGQPNGVAKNGGQIPNFEGQLERNTKDVMLNTPKRQKIGSNDIMHKFICWSIF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0665 404 Gene3D - 18 160 IPR036397 GO:0003676
Glsi13g0665 404 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 135 204 IPR044830 GO:0003700
Glsi13g0665 404 Pfam Reverse transcriptase-like 21 103 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0665 Glsi-ChrGlsi13 25385567 25397005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0665 135 208 Homeobox Transcription Factor Family AT1G52150 63.514 2.23e-22 97.8