Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0640 ATGCTTATGGATTCGTCTTTAGAGGGTTTCACACTCGATCCATCTAAATGCAGTAAGTTGAGTATGGAAGAAAAAAGAGAACTTGTCTATGAAATATCTAAGTGGTCACATGGTGCATCAGAGATGTTACAGTCCTGGAGCCGACAAGAGATTTTGAAAATCCTGTGTGCAGAGATGGGAAAAGAAAGGAAGTATACTGGTTTGACAAAGTTGAAAATTATAGAAAACCTTCTAAAAATTGTTTCCGAAAAGAAATCAGGAGGCCAAGAAATTGCAGCAGACCTTGAACCACTTTCTTCTCCTGCACATGAACAGAAACCTGCTAAAAGGCAGAGAAAAACGGAGAATCCATCTCGATTACCCCTTCCAGCAAACAATGTTTTAGTCACTAATGGTGGTGGAGATGTAGGTAGTACCATATACTGCAAAAATTCGGCTTGTAAAGCTACCCTAAGTCAAGCAGATGCATTTTGCAAAAGATGCTCATGCTGCATTTGTCATCGATATGATGACAACAAAGATCCTAGCCTATGGTTAATATGTAACTCTGAGCCTCCATTTCTTGGTGTTTCTTGTGGCTTGTCATGCCATCTTGAGTGTGCTTTAAAACATGATGGTTCTGGCATAGCCAAAGATGGAGAGCGTCCCAAACTTGATGGTGGCTTCTACTGTGTCTCTTGTGGAAAAGTAAATGATTTGCTCGGATGCTGTAAAAAACAACTGATGGTGGCAAAGGATACCAGACGTGTGGACATACTCTGCTATCGTGTCTCCTTAAGCCAAAGACTTCTACAAGGGACAGAAAACTATCAAAAAATTTATGAAATCATTGATGAAGCAGTGAAGAAACTTGAACCTGATGTTGGTCCATTGACTGGCTCACCAGCGAAGATTGGTAGGGGTATTGTGAACAGACTTTCTTCAGGACCAGATGTTCAGAAACTCTGTGGTTTTGCTCTGGAATCACTGGATTCGTTGCTTTCTAAAAATATCTTGCCTCCGTTATCCAATGCAACAATTCAAGATACAAAATTGATTTCTCCAAATATAGTGGGGTTTGAAGATGTCACTGCAACATCCATCACTGTAGTTCTGGGTTCTGAAGATCCTTCTGCAGAAAATATTATTGGTTACACCTTGTGGTATCGCAATGCACATGATGTGGACTATCCATTGGACCCAACTTGCACGTTGCTTCTTCCGAACAGAAGGTTCAGTATCAGGAGTCTAAGTCCAGCTACAGAATACATTTTCAAAGTTGTTTGCTTCAGTGACTCAAGGGAGTTTGGTATGTGTGAAGTTCATGTTTCAACAGAGCATGGCGAGGATGATGTCCCTAACTGCTCAGCAACTGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGTAGCCTGTCGAATCCATCTTCGGTGGAAGATGAAACTAATAACAGTAATCCATATGGTGACCAGACTGATAATCGAGAGGACAATTATCTTACTTATCAGAAGGATACTGACAAGCTTGCTTGTGGAGTTTTATCTCTTGATGCCATTAATTGTTCCAAAATAGGTGGAGGGGGGCTACAACCAGATGCTGATTCTTTGTCAGACAAGGAACATGCTGTAGGAATGGCTGGCGCCTTACCTGGTTCTGATTTGCTAAAACTTGAAAACAAGCACTCACCAGAGGAGCAAGTTACTGAGGACATGAGCACTGATGATGGGCTGAATTCCCCAGCTCAGACTGGGAGGGAGTGTGTGCCATTTGTAGGTAGCTCAGAAGCAGGCCTTCCTATCACTCCCTGCAAGTTAGAAATACTGAAGGATGGGCCAGGAAGAAATGGGAGATCTAAATCCACTGGCAAGGATCAAGAAAATGGGTTTGGGAAAAGACAAGGTCCCCAAGATGGTAGCACATCTAAGAAGAGAAGTGGGAAAAGACAAGATGAGGCTTGTGCTGCCGATGGGTTTTCACAGCGGGATTTCGAGTTTTACGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACATATAGAGAAGAACTTCAGGCAGAAGTTTTTGACATGGTACAGCCTAAGAGCAACGCCCCAGGAAGTAAGGATTGTGAAAGCATACATTGATACATTTTTGGAAGATCCAGCATCTCTTGCAGAGCAGCTCTTGGACACCTTCTCAGAATGTATATCAAGCAAGAGAACATCTACGGTGCCAGCAGGGTTCTGTATGAAGCTTTGGCATTGA 2220 0.4252 MLMDSSLEGFTLDPSKCSKLSMEEKRELVYEISKWSHGASEMLQSWSRQEILKILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGQEIAADLEPLSSPAHEQKPAKRQRKTENPSRLPLPANNVLVTNGGGDVGSTIYCKNSACKATLSQADAFCKRCSCCICHRYDDNKDPSLWLICNSEPPFLGVSCGLSCHLECALKHDGSGIAKDGERPKLDGGFYCVSCGKVNDLLGCCKKQLMVAKDTRRVDILCYRVSLSQRLLQGTENYQKIYEIIDEAVKKLEPDVGPLTGSPAKIGRGIVNRLSSGPDVQKLCGFALESLDSLLSKNILPPLSNATIQDTKLISPNIVGFEDVTATSITVVLGSEDPSAENIIGYTLWYRNAHDVDYPLDPTCTLLLPNRRFSIRSLSPATEYIFKVVCFSDSREFGMCEVHVSTEHGEDDVPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYGDQTDNREDNYLTYQKDTDKLACGVLSLDAINCSKIGGGGLQPDADSLSDKEHAVGMAGALPGSDLLKLENKHSPEEQVTEDMSTDDGLNSPAQTGRECVPFVGSSEAGLPITPCKLEILKDGPGRNGRSKSTGKDQENGFGKRQGPQDGSTSKKRSGKRQDEACAADGFSQRDFEFYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKAYIDTFLEDPASLAEQLLDTFSECISSKRTSTVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0640 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 739 IPR044514 GO:0010048|GO:0040029
Glsi13g0640 739 MobiDBLite consensus disorder prediction 553 578 - -
Glsi13g0640 739 MobiDBLite consensus disorder prediction 440 488 - -
Glsi13g0640 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Glsi13g0640 739 SUPERFAMILY Fibronectin type III 350 425 IPR036116 GO:0005515
Glsi13g0640 739 CDD FN3 348 425 IPR003961 GO:0005515
Glsi13g0640 739 Gene3D Immunoglobulins 344 444 IPR013783 -
Glsi13g0640 739 MobiDBLite consensus disorder prediction 448 488 - -
Glsi13g0640 739 MobiDBLite consensus disorder prediction 602 618 - -
Glsi13g0640 739 CDD PHD_VIN3_plant 162 227 - -
Glsi13g0640 739 ProSiteProfiles Fibronectin type-III domain profile. 347 443 IPR003961 GO:0005515
Glsi13g0640 739 MobiDBLite consensus disorder prediction 597 643 - -
Glsi13g0640 739 MobiDBLite consensus disorder prediction 91 124 - -
Glsi13g0640 739 MobiDBLite consensus disorder prediction 629 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0640 Glsi-ChrGlsi13 25158616 25164317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0640 3 620 PHD Gene Family AT4G30200 47.264 7.69e-174 511