Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0637 ATGATGGGGGACAGAGGAGTGCAGCTTTCAGGGGGTCAGAAGCAGAGGTTTGCATTAGCGTGGGCTATACTGAAGTACCCAGCAGTGTTGCTGCTGGAGGCCGAGGCTACGAGCGCGCTTGATAGTCAGTCGGTAGAGCGCGTGATGGTGGGGATAAAAAGTGTGGTGGTGGCCCACAGGAGAAAGCTCCAAGAGCCTGGCCCATGTTTCCAGTTTGCTGCCATGGGAATTTTGCTGGTTCCTTCTGAGCTTGTGTCTTGGATAATGAAGGAGGCATCAGGGCCTTTCGAGGAATTTCATAGAATAAAGATGCGGTTTGAGTTTTCTCCACCGTCGTTCCAAACTCCATACGTTGGTTTTGAGACGCACGCCCAGAATACGTTTGATAAATTCGGTGACCGGGTTGATTCCACCATGAAATGGGCAGTTGCAGAGTCTGTGGTTTTCGGGGTGGTGATAATAATAGCCATTATAGCAGTAGTATATGCCATTATTGAGTGCTTGAAGAAGGCAGGAACAGTGATTCCAGCTTACAGTCAGATTCCATCCACAGAGAAGGACTATAAAGTTTCAGAGTCACTTCCTTCAAAGGAAGAAACTGCAGTAGCAATAGTGCCAGAAGATTCACAAGTGGAGTTTGCAACTATGGAAAGATTCCTCAACAACTTCACTAGAGAGAAACCCATCAGATTCTCACCTGAGGAACTTGAAGAAATTACAAGTAACTACTTTACCATATTGGGTTCTGGTGCTTTTGGGGTGGTCTACAAAGGGGAACTTTCAAACGGAGAGCAAGTGGCAGTGAAAGTTCTCAGCAGTTTGGATATGGGAATGGAGGAGCAATTCAAGGCAGAAGTTGGCACAATAGGAAGAACTTACCATATCAATCTGGTTAGACTTTATGGCTTCTGCTTCCACCATGACAGGAGAGCTCTTGTTTACGAGTTTGTAGAAAATGGCTCTCTCAACAAGTTCTTGTTTGGCAGCCAGAACCGAGAAATTGAGTTGGGGAAGCTTCAGGAGATTGCAATTGGAACAGCAAAAGGAATTGCTTATTTACATGAGGAATGTCAGCATAGAATCATTCATTATGATATTAAGCCAGAGAATATACTTCTTGACATGAATTTTGACCCAAAAGTAGCAGATTTTGGTCTGGCAAAACTTTACAGCAGAGCAAGCAGTCACGTGAATATGACACACTTCAGAGGAACCAGGGGATATGCTGCCCCAGAATTGTGGAAGCTTTATCCTGTGACTTATAAGTGTGATGTTTATAGCTTTGGTATTCTTCTCTTTGAAATAGTGGGGAGGAGAAGGCATTTTGATGCTAGCTACAGTGAATCACAACAATGGTTTCCAAAATGGGCATGGGATATGTTTGAGAATCATGAATTAGCAGTAATGCTTTCACTTTGTGGGGTTGAAGAGAAAGATAGGGAAAAGGCTGAGAGAATGTTAATGGTGGCTCTGTGGTGTGTTCAATATTCCCCAGGTGATAGACCTCTTATGAGTACCGTGGCGAAGATGTTAGAGGGTGACATAGAAATCTCTCCACCACCATTTCCTTTCCAGAATTTGGTGTCTGATAAACAAAATTTAACTCCACAAGGAACCACTGAAGATTCAGATACTTCCGCATCGTAA 1647 0.4396 MMGDRGVQLSGGQKQRFALAWAILKYPAVLLLEAEATSALDSQSVERVMVGIKSVVVAHRRKLQEPGPCFQFAAMGILLVPSELVSWIMKEASGPFEEFHRIKMRFEFSPPSFQTPYVGFETHAQNTFDKFGDRVDSTMKWAVAESVVFGVVIIIAIIAVVYAIIECLKKAGTVIPAYSQIPSTEKDYKVSESLPSKEETAVAIVPEDSQVEFATMERFLNNFTREKPIRFSPEELEEITSNYFTILGSGAFGVVYKGELSNGEQVAVKVLSSLDMGMEEQFKAEVGTIGRTYHINLVRLYGFCFHHDRRALVYEFVENGSLNKFLFGSQNREIELGKLQEIAIGTAKGIAYLHEECQHRIIHYDIKPENILLDMNFDPKVADFGLAKLYSRASSHVNMTHFRGTRGYAAPELWKLYPVTYKCDVYSFGILLFEIVGRRRHFDASYSESQQWFPKWAWDMFENHELAVMLSLCGVEEKDREKAERMLMVALWCVQYSPGDRPLMSTVAKMLEGDIEISPPPFPFQNLVSDKQNLTPQGTTEDSDTSAS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0637 548 MobiDBLite consensus disorder prediction 528 548 - -
Glsi13g0637 548 FunFam serine/threonine-protein kinase PBS1-like 210 316 - -
Glsi13g0637 548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 62 IPR027417 -
Glsi13g0637 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Glsi13g0637 548 Gene3D - 2 60 IPR027417 -
Glsi13g0637 548 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Glsi13g0637 548 FunFam Putative receptor-like protein kinase 317 519 - -
Glsi13g0637 548 Gene3D Phosphorylase Kinase; domain 1 200 316 - -
Glsi13g0637 548 Gene3D Transferase(Phosphotransferase) domain 1 317 517 - -
Glsi13g0637 548 Pfam Protein kinase domain 245 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0637 548 SUPERFAMILY Protein kinase-like (PK-like) 223 512 IPR011009 -
Glsi13g0637 548 ProSiteProfiles Protein kinase domain profile. 241 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0637 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 138 521 - -
Glsi13g0637 548 SMART serkin_6 241 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0637 Glsi-ChrGlsi13 25116381 25123427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0637 230 548 Receptor kinase-like Gene Family AT5G38280 39.877 2.28e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Glsi13g0637 Pkinase 2.2e-47 CL0016