Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0620 ATGGCAAAACTTGACACCTACATAAACAAGATTTCTGTGAGAGGCAAGCCGTCACTGAACTTTGCTCTCTGTCTTCCCATTTGGTTTTCGCTTGTGCTTAGAGAAGTCATGGGAGTGTTCACATTCGTGCTCCGCAGCTCCGGCGGCGAATGGACGGCAAAGCAGTGCTCCGGTGACATCGAGGCCTCCGCTGCCTCGACCTTCGAGATCCAAAGGAAGCTTGTCCAGTCCGCCCTCGCCGTCGATTCCTCCGGTGGTGTTCAGTCCTCTTTCTCTCTCGTCTCCCCCTCCTCTGCCGTTTTCCAGGTGGTTGTGGGCGGAGCAGTATTTGTGGGAGGTGGTGTAGCTGCAGCTGCTGGTCCTGCAGGAGGTGCAGCCCCAGCTGGAGATGCTGCCCCAGCTGCAGAGAAGAAAGAAGAAAAGGTGGAGGAAGAGGAGGAGGACGACGATATGGGATTTTCACTTTTTGATTAG 474 0.5485 MAKLDTYINKISVRGKPSLNFALCLPIWFSLVLREVMGVFTFVLRSSGGEWTAKQCSGDIEASAASTFEIQRKLVQSALAVDSSGGVQSSFSLVSPSSAVFQVVVGGAVFVGGGVAAAAGPAGGAAPAGDAAPAAEKKEEKVEEEEEDDDMGFSLFD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0620 157 Hamap 50S ribosomal protein L12 [rpl12]. 35 157 IPR027534 GO:0003735|GO:0005840|GO:0006414
Glsi13g0620 157 Pfam 60s Acidic ribosomal protein 111 156 - -
Glsi13g0620 157 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 37 157 IPR044252 GO:0003735|GO:0005840
Glsi13g0620 157 MobiDBLite consensus disorder prediction 120 157 - -
Glsi13g0620 157 MobiDBLite consensus disorder prediction 141 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0620 Glsi-ChrGlsi13 24868063 24871496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0620 37 104 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 75.000 1.44e-30 105