Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi13g0606 | ATGTTGGGTTTATTCGCAGCTTCGCGTGCTACTTTTGGACTATACATTCTGATACAGAGCCTACTTACTTTAAGTGATTGCTTCAATTTGAGAAATGTAAATTTAATTCCTATCCTTTTACTTTCTCGCTCTGATGCCTCTGTTTTGCTGATCAGAGCTGCATTCACTTTAAAACTATTTTTTCCCACTGACAATAGTTATGTTTACTGCGCTTCATCCTTTTGGCAATCTTATGAACTATTGAAATTGACATCAGTGAACATGATGTTGTTGAACTTTCGGTGTATCTTTGTAATTTTATCTTACCTTCTGGTTGCTGGGAAGGCAGAGATTTATATAGCAACTATTGAAGGTGAACCTGTTATAAGTTACACAGGAGGTATTGATGGATTTGAAGCCACTGCTGTGGAATCTGATGAGAAGATTGATACCACAAGTGAATTGGTTACTTCTTATGCTCGTCACCTTGAGCATAAACATGATATGCTTCTTGGGATGCTGTTTGAACGTGGGACCTACAGGAAACTTTATAGTTATCGTCATCTTATAAATGGATTTGCTGTTCATGTTTCTCCAGAACAGGCAGAAACCCTAAGACGTGCTCCTGGAGTAAAATCTGTTGAGAGAGACTGGAAAGTAAGGAGACTTACTATACATACCCCAGAATTTTTGGGGCTACCAACAGGGGTATGGCCAACAGGAGGTGGGTTTGACCGGGCAGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTATCCATACCACCCCAGCTTTGCAACTCATAATACGGAACCATATGAGCCGGTGTCAAGATATCGAGGAAAATGTGAAATTGATCCAGATACTAAGAAGGACTTCTGCAATGGGAAGATTGTTGGAGCACAACATTTTGCACAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTTGCTTCTCCTCTAGATGGGGATGGGCATGGAAGTCACACAGCTGCTATTGCAGCCGGAAATAATGGAATTCCTGTGAGGATGCACGGCTATGAATTTGGGAAAGCAAGTGGAATGGCACCCCGAGCCAGGATTGCTGTATACAAGGCACTTTATAGACTTTTTGGAGGGTTTGTTGCAGATGTAGTTGCCGCAATTGATCAGGCTGTGCATGATGGGGTGGATATACTCAGCCTTTCTGTTGGACCAAATAGTCCCCCAGCAACTACCAAAACCACATATTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCAGGTGTATTTGTTGCACAGGCCGCCGGAAATGGTGGTCCCTTTCCTAAGACCTTGGTTTCATATAGTCCATGGATAGTGTCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATCTGACCCTTGGAAATGGAAAAAATTTAGCTGGACTTGGGTTGTCACCTTCTACACATCCAAACCAAACGTACACATTGGTTGCTGCCAATGATGTGCTACTAGATTCTTCAATTATGAAGTACAGCCCCACAGATTGCCAGAGGCCAGAAGTCTTGAACAAGAAATTGGTAGAGGGGAATATTCTTCTTTGTGGCTATTCTTTCAACTTTGTTTCTGGTACTGCATCAATAAAGAAAGTCTCAGAAACAGCCAAGGCCCTTGGTGCTGTGGGATTTGTTGTTTGTGTTGAAAATGTTTCTTCTGGAACAAAATTTGATCCAGTTCCTGTTGGCATTCCCGGGATTCTTATCACTGATGTCAGCAACTCAAAGGAACTTATAGATTATTATAATATCTCTACACCAAGAGATTGGACTGGCCGTGTGAGGAGTTTTAAAGGTACAGGTAGAATTGGGGACGGTTTGATTCCTATTCTCCATAAATCTGCACCACAGGTGGCATCATTCTCTTCTCGTGGGCCAAATATAAAAGACTTCAGTTTCCATGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTCTCCAAATGGAACTGATGAGCCTAATTATGTTGGAGACGGATTTGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGGATAGCTGCTCTTATAAAGCAGAAGCATCCTCAATGGAGCCCTGCTGCAGTTAAGTCATCTCTGATGACATCATCAACAACTCTAGACAGAGCAGGAAGACCTCTTGTAGCACAGCAATATTCTGAGACAGAAGATATGAAGCTGGTCACAGCTACTCCTTTTGACTACGGGAGTGGACATGTTAATCCTAGAGCTGCCTTGGACCCTGGACTCATATTTGATGCAGGATATGAAGATTACTTGGGTTTCTTGTGCACAACACCTGGCATTGATGTTAATGAGATAAGGAACTACACAAACTCACCATGTAACAATAGCATGGGCCACCCATCAAATTTCAACACTCCATCAATTACGGTTTCCCATCTTGTGGGAACTCAAACTATCACTCGCATTGTCACAAATGTTGCCGAGGAAGAAACCTATGTGATCACAGCCAGAATGGACCCGGCTGTTGCCATTGAAGTCAACCCTCCAGCAATGACTCTTAAACCAGGTGCGTCACACAAGTTTTCTGTGACTCTTACAGTTCGCTCAGTGACAGGAACTTACAGTTTTGGAGAAGTCTTAATGAAAGGCAGCCAAGGGCACAAGGTGAGGATTCCTGTTCTGGCCAATGGATACCCAAGATAG | 2715 | 0.4287 | MLGLFAASRATFGLYILIQSLLTLSDCFNLRNVNLIPILLLSRSDASVLLIRAAFTLKLFFPTDNSYVYCASSFWQSYELLKLTSVNMMLLNFRCIFVILSYLLVAGKAEIYIATIEGEPVISYTGGIDGFEATAVESDEKIDTTSELVTSYARHLEHKHDMLLGMLFERGTYRKLYSYRHLINGFAVHVSPEQAETLRRAPGVKSVERDWKVRRLTIHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPYHPSFATHNTEPYEPVSRYRGKCEIDPDTKKDFCNGKIVGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTYLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIVSVAAAIDDRRYKNHLTLGNGKNLAGLGLSPSTHPNQTYTLVAANDVLLDSSIMKYSPTDCQRPEVLNKKLVEGNILLCGYSFNFVSGTASIKKVSETAKALGAVGFVVCVENVSSGTKFDPVPVGIPGILITDVSNSKELIDYYNISTPRDWTGRVRSFKGTGRIGDGLIPILHKSAPQVASFSSRGPNIKDFSFHEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGDGFAMISGTSMAAPHIAGIAALIKQKHPQWSPAAVKSSLMTSSTTLDRAGRPLVAQQYSETEDMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTPGIDVNEIRNYTNSPCNNSMGHPSNFNTPSITVSHLVGTQTITRIVTNVAEEETYVITARMDPAVAIEVNPPAMTLKPGASHKFSVTLTVRSVTGTYSFGEVLMKGSQGHKVRIPVLANGYPR | 904 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi13g0606 | 904 | Gene3D | Peptidase S8/S53 domain | 243 | 774 | IPR036852 | GO:0004252|GO:0006508 | |
| Glsi13g0606 | 904 | Pfam | Subtilase family | 241 | 724 | IPR000209 | GO:0006508|GO:0008236 | |
| Glsi13g0606 | 904 | CDD | PA_subtilisin_like | 463 | 601 | - | - | |
| Glsi13g0606 | 904 | CDD | Peptidases_S8_3 | 217 | 720 | IPR034197 | - | |
| Glsi13g0606 | 904 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 137 | 215 | IPR037045 | - | |
| Glsi13g0606 | 904 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 246 | 257 | IPR023827 | - | |
| Glsi13g0606 | 904 | SUPERFAMILY | Subtilisin-like | 216 | 765 | IPR036852 | GO:0004252|GO:0006508 | |
| Glsi13g0606 | 904 | Gene3D | - | 778 | 901 | - | - | |
| Glsi13g0606 | 904 | PRINTS | Subtilisin serine protease family (S8) signature | 320 | 333 | IPR015500 | - | |
| Glsi13g0606 | 904 | PRINTS | Subtilisin serine protease family (S8) signature | 241 | 260 | IPR015500 | - | |
| Glsi13g0606 | 904 | PRINTS | Subtilisin serine protease family (S8) signature | 683 | 699 | IPR015500 | - | |
| Glsi13g0606 | 904 | FunFam | Subtilisin-like protease SBT1.5 | 243 | 465 | - | - | |
| Glsi13g0606 | 904 | SUPERFAMILY | Protease propeptides/inhibitors | 174 | 214 | - | - | |
| Glsi13g0606 | 904 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 169 | 897 | IPR045051 | - | |
| Glsi13g0606 | 904 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 684 | 694 | IPR023828 | - | |
| Glsi13g0606 | 904 | Gene3D | - | 456 | 621 | - | - | |
| Glsi13g0606 | 904 | Pfam | Fibronectin type-III domain | 806 | 898 | IPR041469 | - | |
| Glsi13g0606 | 904 | Pfam | Peptidase inhibitor I9 | 151 | 214 | IPR010259 | - | |
| Glsi13g0606 | 904 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 210 | 761 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi13g0606 | Glsi-ChrGlsi13 | 24701958 | 24709021 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi13g0606 | 109 | 904 | Subtilisin-like Serine Gene Family | AT2G19170 | 83.187 | 0.0 | 1372 |