Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0574 ATGGGGAACTGCTGGAGTAATCAATCCGCTGGCAACAATCAAGGGAGAGACCAGTTATTTGGTGGACACAATAATGCGAGGTTATCTCAAAGTACAAGAAATTCTACTTCTTTTGGATGTAGCAGCCATTCTGCAAGGAGTAGTAGGCTATCTGGGCCAAGTAGCAGCAATATCTGCACAACCAGCAATACTAATACATCTCTTTTGTACTCTGAGAATAGCCAAACCTTGCAAGCAAGAGAAGAAGATGATTTTCCTAATGGGCAGATCTTGGATGTTGCAAACTTGAAAGTTTTCACTCTGGCAGAACTGAAGGCAGCCACTAAAGATTTCAGAGCTGATACTCTGTTAGGACAGGGAGGTTTTGGTGGAGTATACAAGGGTTGGCTTAAGGGGAGAGTAGTAGCTTCAAATAGAGATGGGGAATCGGTCATCGCCATCAAGAGATTGAATTCTACTAGCAGGCAAGGGATTGCAGAATGGCTGTCAGAGGTAAATTTCTTAGGAAGGCTTTCTCATCCCAACGTCGTAAGGTTATTGGGATTTGGCAGCGAGAATAGGGGCTCAAATGTTCGACCACTTTCATGGGACACAAGGCTTAAGATTATGATTGGAGCAGCTAGAGGCCTGAATTTCTTGCACTCTTTAGAGACCAAAGTTATATACAGAGATTTTAAGCCTTCAAATATACTGCTTGACAAGGTTATGGGGACCCACGGCTATGCTGCTCCTGAATACATTGCCACAGGTCATTTGTACGTGAAAAGTGATGTGTATGGATTTGGGATTGTTTTGGTGGAGATTCTGACTGGGAAAAGGATAGCTGATATAATGAAGCTATGTGGGCAACACCAATCTTTGCTTGATTGGCTGAAATCAAACCTATTGAGCAGAATGAAGATGAGAAACACAATGGACGCAAGGTTACAAGGCAAATACCCATCCAAGTCAGCTTCACAAGTGGCTCAACTTGCTCTTAGATGCGTCCAACAGACCCCAAAGTAA 1005 0.4328 MGNCWSNQSAGNNQGRDQLFGGHNNARLSQSTRNSTSFGCSSHSARSSRLSGPSSSNICTTSNTNTSLLYSENSQTLQAREEDDFPNGQILDVANLKVFTLAELKAATKDFRADTLLGQGGFGGVYKGWLKGRVVASNRDGESVIAIKRLNSTSRQGIAEWLSEVNFLGRLSHPNVVRLLGFGSENRGSNVRPLSWDTRLKIMIGAARGLNFLHSLETKVIYRDFKPSNILLDKVMGTHGYAAPEYIATGHLYVKSDVYGFGIVLVEILTGKRIADIMKLCGQHQSLLDWLKSNLLSRMKMRNTMDARLQGKYPSKSASQVAQLALRCVQQTPK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0574 334 ProSitePatterns Protein kinases ATP-binding region signature. 117 148 IPR017441 GO:0005524
Glsi13g0574 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Glsi13g0574 334 MobiDBLite consensus disorder prediction 1 58 - -
Glsi13g0574 334 ProSiteProfiles Protein kinase domain profile. 111 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0574 334 PANTHER OS01G0588500 PROTEIN-RELATED 58 234 - -
Glsi13g0574 334 Gene3D Transferase(Phosphotransferase) domain 1 235 334 - -
Glsi13g0574 334 Pfam Protein tyrosine and serine/threonine kinase 241 333 IPR001245 GO:0004672|GO:0006468
Glsi13g0574 334 Pfam Protein tyrosine and serine/threonine kinase 114 185 IPR001245 GO:0004672|GO:0006468
Glsi13g0574 334 SUPERFAMILY Protein kinase-like (PK-like) 96 333 IPR011009 -
Glsi13g0574 334 Gene3D Transferase(Phosphotransferase) domain 1 187 234 - -
Glsi13g0574 334 Gene3D Phosphorylase Kinase; domain 1 95 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0574 Glsi-ChrGlsi13 24290929 24294874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0574 88 329 Receptor kinase-like Gene Family AT4G02010 37.671 7.89e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi13g0574 PK_Tyr_Ser-Thr 6e-07 CL0016