Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0554 ATGAATTTCATACATACAGCTGGGTCATTAATTGAAGGAGGGTCAGGTTCCATTTCTTCATCATTTCGCTCTAGCATGGCAGCCAATATGGGTTCTGCTAAGACTTTCAGTGTAACAGACATTGAGAGAGCCACTGATAATTTCCACGATTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGCTATCCTTGAAGATGGGACAAAAGTGGCGGTTAAGGTTCTAAAGAGGGAGGACCGTCATGGTGATCGTGAATTCTTGGCTGAAGTTGAGATGCTTAGTCGCCTTCATCATCGAAATTTGATTAAGTTGATTGGTATATCTACAGAGGACAGCTTCCGCTGCTTGGTTTATGAACTCATTTCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAAGAAACCAGCCCACTTGATTGGGGTGCTCGGATGAAGATAGCTCTTGGTGCTGCCCGTGGTCTAGCTTATCTGCATGAAGATTCAAGTCCTGGTGTCATACACAGGGACTTCAAGTCTAGCAACATCTTGTTGGAAGATGACTTTACTCCAAAAGTATCTGATTTTGGATTGGCTCGAACTGCAATGGATGAGGAAAACAGACACATATCAACACGTATCATGGGAACTTTTGGTTATGTGGCCCCAGAGTATGCAATGACTGGCCATATTCTTGTAAAGAGTGATGTCTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAATCGGTAGACATGTCACAACCTCCTGGTCAAGAGAATCTTGTTACATGGGCCCGTCCACTCCTTGCAAGTAAAGAAGGATTGCAAGTAATAATAGATCCATCTCTGGGATCTGATGTACCTTTTGGTAGTATCACTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTAACGAACCGGCCCTTCATGGGTGAGGTTGTGCAGGCTTTAAAACTTGTATATAATGAATGTGATGAAGCAATAGAAGCAGGTTCAAGAAGTTCAAGCCAGGAGGATTTGTCTGTCGATTTGGATATGGGAGTCAGTTCTGTTTCTGGACAATTTCCAGATAATTTCCTAAGCCAATGCTCTGCTACTAACTATGATTCTGCAGTTGATATTGAAAGGGGCTTGTCAATGTCAGAATTATTCAGTTCATCAGCAAGATTTGGAGGGCAGGTATCTGGGTCATTTAAAAGACAGGCTTATTCGGGTCCTCTGAGAACCGGTAGAAGCAGGCGGTTGTGGCAGATAATTAGAAGGTTTTCTGGGGGTAGTGTCAGTGAACATGGAACTATGTTCAAGTTTTGA 1323 0.4301 MNFIHTAGSLIEGGSGSISSSFRSSMAANMGSAKTFSVTDIERATDNFHDSRILGEGGFGRVYSAILEDGTKVAVKVLKREDRHGDREFLAEVEMLSRLHHRNLIKLIGISTEDSFRCLVYELISNGSVESHLHGVDKETSPLDWGARMKIALGAARGLAYLHEDSSPGVIHRDFKSSNILLEDDFTPKVSDFGLARTAMDEENRHISTRIMGTFGYVAPEYAMTGHILVKSDVYSYGVVLLELLTGRKSVDMSQPPGQENLVTWARPLLASKEGLQVIIDPSLGSDVPFGSITKVAAIASMCVQPEVTNRPFMGEVVQALKLVYNECDEAIEAGSRSSSQEDLSVDLDMGVSSVSGQFPDNFLSQCSATNYDSAVDIERGLSMSELFSSSARFGGQVSGSFKRQAYSGPLRTGRSRRLWQIIRRFSGGSVSEHGTMFKF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0554 440 FunFam receptor-like serine/threonine-protein kinase ALE2 21 123 - -
Glsi13g0554 440 FunFam Receptor-like serine/threonine-protein kinase ALE2 124 343 - -
Glsi13g0554 440 ProSiteProfiles Protein kinase domain profile. 48 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0554 440 CDD STKc_IRAK 54 322 - -
Glsi13g0554 440 Gene3D Transferase(Phosphotransferase) domain 1 124 345 - -
Glsi13g0554 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Glsi13g0554 440 PANTHER OS01G0750732 PROTEIN 14 349 - -
Glsi13g0554 440 Pfam Protein tyrosine and serine/threonine kinase 51 321 IPR001245 GO:0004672|GO:0006468
Glsi13g0554 440 Gene3D Phosphorylase Kinase; domain 1 19 123 - -
Glsi13g0554 440 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Glsi13g0554 440 SUPERFAMILY Protein kinase-like (PK-like) 29 322 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0554 Glsi-ChrGlsi13 24132237 24134691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0554 32 436 Receptor kinase-like Gene Family AT5G56890 70.443 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi13g0554 PK_Tyr_Ser-Thr 1.9e-46 CL0016