Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0545 ATGGAGGAAGATCAGTTGGGAACATCAAAATCCTCTGAAACTCTAATGGGTTTTCCTCGTTACCGTCGATCACATTTAAAAAGCGAAACTTTCCGTACTCTGGTTTGTATCCTATCCCACTGCTACGACGAATCCCAGCTTTCTAGTGCCAATCAAATTCGGTGTTCATCTCAGGAGCTGAACAATCGTGATAATGGCACTGATAGAATTGGGCAAGAAAGCCAAGAAAAGGAGTCTGAACACTTAAAATTCACTGGTACTGATTTTACGGATCCCAAGGATCCTGTACCTCAGAAAGAAACCCAGGTTTTTGAGACCTCTGAAGGGGTTGGTGTCCAGGGCAGGGAGTTTAGTGGAGAGTTTATGGTGGGAGTAGAGGAAGATGAAGGCTTTCCTAGAAGACAAGATATGATGATCTGTGAAAGTGAAAGTGTTGAGACAATGTCTATGCGAGCTAATGATTTAGATAAGGAACAGAAGCTGATAGATGAGTTGGATCAGATTGTAAAAGTAACTGAAAAACGTGTCTGTGACAGTGGTTTAACCCCCTTGAACTTGGGATTAGGTGAGCAACAGAATGACAGCAGTGAATTTGAGTTGATGGATTATCAAGTAGAGTATGTTGAGTTTCAACAATCTGATATTACCACATCTAGAACTGAAAGTGAGTTACAAGTAGAAGAAGAATCTAATCAACATGCCCCAGAAGGCTTTCATGCACCTTTAATTGCCAACATTTCAACATCTACAAAGGAACAAACCTCTGAACCAGTAATTAGTACATTGAGTACGAAACACGAGAGACAGCAAAAGGACACAGAATTGGTGGAACCAGTATGTGCTGCAATGGGTTCTTTTCCTACTATTGAAGAGGGTGGATTTGAGAAGGAAGAAGAATGTGGTCAAAAGGTTCCTGAAGGAAAGAACTTTACTGTAGATCAGGATATGAACAGTGAAGCATTGAATTTCAGTGAATATGATGGAGAGATGTCATTACTGGACATCAATATTTTGGAAGCTAAACATGTAATGCAGCATGAAGAAGAGCAACCAGAAAAAGTAATTTGTGCAAATGATGCAACATTATTTTCCAATAATCTAACTGAGGAAGGAGACGTTGAAGAGGGAGAAATTTCTGGTGACTTTGGTATGGATGACAATTCGTTTGATATGTCTTCTGAAGATTCTTCGATGCTACAACAGAAGAAAATAGATGAGGTTCAAAAGCCCAAAAATGTAATAGAAAATATAGTATTTCCTTTTAATATACAGAATGGAGAAAAAGAAGAAAATTGTGAACCTACTTCCTTTAAGGTACACACCCCACTGGAATCCTATAAAAGTGGGCAAGTAGAACCTAGGACAAGTGATAAGAATGGCTTGGCATGTGGAGTTGACATAGGAATCACTCGAGAAATTATTAATTATGGAGATCTAGGTGAGCATGGTTTTGTGCTAGAGACTGGAAAAAGTGGAAACAGAGACAATGGAAATAAAGAGGCTGTTGACTTGCAAGCAGCTTTGGCTTATAATCAAGTCTTGCACAGAGGCTCCTTGGAAGAAGAAGCTACTAAAGATCATCAAAACTCGTCTATGGTAAAGAAGGCTGGTGTCAACTGTAAGAAAAAGCGTGGTCCTGTTACGGAGGAAAAGAAGGCTAAGAAGAAGGAAAAGAAACGAAAGAAGCGGGCAGAAATGAACAGAAAACTTGGTGTTAAAAGGATTAAGTTGCTACCAGTACAGAAACCGAAAACCATCACATATTGCCGCCATTATCTCAAGGGAAGATGCCATGAGCCATGCTGTCATTTTGCACGTCACTCTTGCATGAAGGGGGATGACTGTCCATTTGATCATCAGCTCTCCAAGTATCCTTGTAGCAATTTTGTGACCAAAGGTTCTTGCAGCAGAGGTGATGCTTGTATGTTTTCGCACCAGATGCCAACCAAGCAAGATATTTCTACATCTTCAAATGATAACAGACCGGAGTCGAAGCCTCAACTTCTGTTAGAAAATACAAATTTGAGCAAGCCACTTAACATTAGTGGTCATAGCGCTTCTCAGCGAAAATGCTTCTCTAATTCTAAGGGAATTCAATCTCACATCAATTCACAACATGAGGTGGCAGACACTGTACAGAAAACACCCACACTGGCACCTAAAGGAATTAGTTTCATCAATGTTTCAAAATCATCATCACTCAGCCCTAGTACTCAAAAACAAGGCATGGTGACTCCAAACAAGGAAAGTGTTGTCCAAATTAAGACCCGTACAGACCAAAGAGCATCTGGCTCAGCTCAAAACTTGGAGGAGGATCCCAAGAAAATGCCAGTGGTGGCACCAAAGGGAATTAATTTTCTTTCATTTGGCAAAGGTCGTGTTTCCAGTTTCAGCAGTTCTATCAGCTCCTTTTTAAATAGGCAAAGTAGTATCAACTTGTCTCAAATAGACAATTTTGGTTCGCCTCAACGGGAAATTTCATCTCTAAATAAGGACAATTGCAGCAAAGTTGGTGATGGGACAGAGCAAAATATATTGCAAACGGCTCCGTACTCAAATGAAATTGAAAAGAAAAATCAATCTGTAGCAGAAGAAAGGAATTTGATTTTTCCGGGAAAAGCTTCAGGAGGTGATTCTACTAATGGTGTACAATGTAGCTTGACCTCTCATCAGGACCACAGTCTGAGTAGATCAGTACAAGAGGGAGTAAAGGCATATACATCTCAGACTTCAACTGTGAACTCGTCTATGCTACCAGTTTCTCCATTTGTTTTAGGTCATTCTTCAGAGCGCCTAGCTTTTGGACATCATAAACATGTATCTAACTCAGCCCAAAGGACACTGTTATCAACTTTATCATTTGCAGCTGAGCATGAATCAAAAATTAAGATGAAATGCTCTGCTGGTGTATCAGCTCTAAGATCAGAGGTGAATAAGGATATCAGCAATAACAGTTCATAG 2961 0.4002 MEEDQLGTSKSSETLMGFPRYRRSHLKSETFRTLVCILSHCYDESQLSSANQIRCSSQELNNRDNGTDRIGQESQEKESEHLKFTGTDFTDPKDPVPQKETQVFETSEGVGVQGREFSGEFMVGVEEDEGFPRRQDMMICESESVETMSMRANDLDKEQKLIDELDQIVKVTEKRVCDSGLTPLNLGLGEQQNDSSEFELMDYQVEYVEFQQSDITTSRTESELQVEEESNQHAPEGFHAPLIANISTSTKEQTSEPVISTLSTKHERQQKDTELVEPVCAAMGSFPTIEEGGFEKEEECGQKVPEGKNFTVDQDMNSEALNFSEYDGEMSLLDINILEAKHVMQHEEEQPEKVICANDATLFSNNLTEEGDVEEGEISGDFGMDDNSFDMSSEDSSMLQQKKIDEVQKPKNVIENIVFPFNIQNGEKEENCEPTSFKVHTPLESYKSGQVEPRTSDKNGLACGVDIGITREIINYGDLGEHGFVLETGKSGNRDNGNKEAVDLQAALAYNQVLHRGSLEEEATKDHQNSSMVKKAGVNCKKKRGPVTEEKKAKKKEKKRKKRAEMNRKLGVKRIKLLPVQKPKTITYCRHYLKGRCHEPCCHFARHSCMKGDDCPFDHQLSKYPCSNFVTKGSCSRGDACMFSHQMPTKQDISTSSNDNRPESKPQLLLENTNLSKPLNISGHSASQRKCFSNSKGIQSHINSQHEVADTVQKTPTLAPKGISFINVSKSSSLSPSTQKQGMVTPNKESVVQIKTRTDQRASGSAQNLEEDPKKMPVVAPKGINFLSFGKGRVSSFSSSISSFLNRQSSINLSQIDNFGSPQREISSLNKDNCSKVGDGTEQNILQTAPYSNEIEKKNQSVAEERNLIFPGKASGGDSTNGVQCSLTSHQDHSLSRSVQEGVKAYTSQTSTVNSSMLPVSPFVLGHSSERLAFGHHKHVSNSAQRTLLSTLSFAAEHESKIKMKCSAGVSALRSEVNKDISNNSS 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0545 986 MobiDBLite consensus disorder prediction 521 565 - -
Glsi13g0545 986 MobiDBLite consensus disorder prediction 214 233 - -
Glsi13g0545 986 SMART c3hfinal6 596 621 IPR000571 GO:0046872
Glsi13g0545 986 SMART c3hfinal6 623 647 IPR000571 GO:0046872
Glsi13g0545 986 ProSiteProfiles Zinc finger C3H1-type profile. 595 619 IPR000571 GO:0046872
Glsi13g0545 986 MobiDBLite consensus disorder prediction 69 88 - -
Glsi13g0545 986 Gene3D - 598 660 - -
Glsi13g0545 986 MobiDBLite consensus disorder prediction 730 749 - -
Glsi13g0545 986 Coils Coil 155 175 - -
Glsi13g0545 986 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 193 979 IPR045124 GO:0003723|GO:0045892
Glsi13g0545 986 ProSiteProfiles Zinc finger C3H1-type profile. 620 648 IPR000571 GO:0046872
Glsi13g0545 986 SUPERFAMILY CCCH zinc finger 624 650 IPR036855 GO:0046872
Glsi13g0545 986 MobiDBLite consensus disorder prediction 59 97 - -
Glsi13g0545 986 Coils Coil 547 567 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Glsi13g0545 None None None