Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0527 ATGTTGAGCAACAATCTTCCAGACGACATCGTGAAGGAAATTGCAGTGAGGCTGCCTGTGAAATCCCTGCTTCGATTCAAATGCTTAGCCAAATCTTGGTATGCTCTTGTCACAAACCCATGTTTCATTTCCAAACAACTTGACTGGTCCAATTCAATCGCCAATAACAACCGTCTTCAGCTTATCTTTCGTTTGCATAGTCTCACTCTTAAGCCCTGCATTTCCCTGCTTTCCAACGAACCACCTCATGTGTCCAACGATATAGAATTGCCATTTCCCGAAAAGAATGTGGAATATATATTTGTTTATGGTCAATGCAATGGGATTTTCTGTCTTCAGGGGGTTTATAGAGGGAACAATCAGGGGTGTAGTTCTTCTGCTGAGGGTGGTGCCAGTATCATTCTGTGGAATCCAGGAACCAAGGAGGTGAAGGTTCTTCCCCCTTCTCCTAGACAACCCAAAGATATGGTGTATGTCATATTTGGGTTTGGGATTGATCCCATTACAAAAGACTATAAAGTTGTACGGTTTGGAAATTTGGCTTTTGAAGGGCGCGAACAACCCCCAGTCGAGGTATATAATCTTAGTACCAATTCTTGGAGAATGATCAATGCTATTGTGCCTGCTTTTCGTTTGTGCTATCCAAAGTGTAGGGCTTATTTGAATGGAGTTTATCATTGGTTATCTGATGATAATAATAAAAAGGCTATTCTTTGTTTTGACTTCAGCAAAGAGGTGTTTGGAAAACTGCAATTGCCTCATGTTATTGACTACTGTGATGAAGTAAATGTTGCTATCGTTGACGAGAGTCTTGCTTGTATTACTACATATTATATGGCCAATTTTCGGTTTGAGATTTGGGTGATGAATGAGTATGGTGTTGATAGTAGTTGGACTAAAAAATATGAGATTGGACCACACCCTGAGTTTGGGTTTTTCTTGGGGTTCTGGAGAGATAATGAGATTCTTGTGGAAGATGGGGGACAATTGGTTTCATACAATCTTGGCAACCAGCAAGTTCAAAGATTTGAAATCCATGGAGTTCCAAGAATGTTTCGGGTGTTTGGCTATGTGGAAAGTCTAATTCCTTTAGCAACTTAA 1101 0.4042 MLSNNLPDDIVKEIAVRLPVKSLLRFKCLAKSWYALVTNPCFISKQLDWSNSIANNNRLQLIFRLHSLTLKPCISLLSNEPPHVSNDIELPFPEKNVEYIFVYGQCNGIFCLQGVYRGNNQGCSSSAEGGASIILWNPGTKEVKVLPPSPRQPKDMVYVIFGFGIDPITKDYKVVRFGNLAFEGREQPPVEVYNLSTNSWRMINAIVPAFRLCYPKCRAYLNGVYHWLSDDNNKKAILCFDFSKEVFGKLQLPHVIDYCDEVNVAIVDESLACITTYYMANFRFEIWVMNEYGVDSSWTKKYEIGPHPEFGFFLGFWRDNEILVEDGGQLVSYNLGNQQVQRFEIHGVPRMFRVFGYVESLIPLAT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0527 366 PANTHER BNAA05G37150D PROTEIN-RELATED 3 351 - -
Glsi13g0527 366 SUPERFAMILY F-box domain 4 58 IPR036047 GO:0005515
Glsi13g0527 366 SMART fbox_2 6 46 IPR001810 GO:0005515
Glsi13g0527 366 NCBIfam F-box protein interaction domain 106 324 IPR017451 -
Glsi13g0527 366 CDD F-box_AtFBW1-like 4 42 - -
Glsi13g0527 366 Gene3D - 4 42 - -
Glsi13g0527 366 Pfam F-box associated 220 317 IPR006527 -
Glsi13g0527 366 ProSiteProfiles F-box domain profile. 1 52 IPR001810 GO:0005515
Glsi13g0527 366 Pfam F-box domain 5 42 IPR001810 GO:0005515
Glsi13g0527 366 SUPERFAMILY Galactose oxidase, central domain 130 336 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0527 Glsi-ChrGlsi13 23930160 23931260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0527 191 314 Carbohydrate Esterase AT1G25141 26.667 1.89e-07 49.7