Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0524 ATGGCCGGTGGAACCGAAGCTTTCCCAGATTTGGGAAAACATTGCCAGCATCTTGATTGCAACCAACTCGATTTTCTTCCTTTCACATGCGACGGTTGCAGACAGGTTTTCTGTGTGGAACATAGATCTTCCAAGTCCCACGATTGTCCCAAATCAGACCATAACAGCAGGAAGGTTGTGGTGTGCGAAACATGTTCGATGTCAATGGAGACCACCGGTCACCATGGAGAGGACGAGATGGCTATATTGGAGAAGCATCACAATTCTGGGGATTGTGACCCCAAGAAGAAAAAGAAACCCACTTGTCCTGTAAGGAGGTGCAAGGAGGTTCTAACGTTTTCTAATACCAGTACTTGTAAAACTTGCCGGTTGAAGGTGTGCCTCAAGCATCGTTTCCCAGCCGACCATGCTTGTAAAACAGCAACTTCTTCTTCCTTGTCATCACCTCGAGCTGCTGCTAATGGGAGATGGAATGATCGGTTCTTGGCTGCTCTGGCTTCAAGGAATGGACAACATTGTTCCAAGAGTGGTGGACGTCGTTCTACATCTCCTCCTAGTACACCATCTGTTAAAGCCTGCTGA 582 0.4759 MAGGTEAFPDLGKHCQHLDCNQLDFLPFTCDGCRQVFCVEHRSSKSHDCPKSDHNSRKVVVCETCSMSMETTGHHGEDEMAILEKHHNSGDCDPKKKKKPTCPVRRCKEVLTFSNTSTCKTCRLKVCLKHRFPADHACKTATSSSLSSPRAAANGRWNDRFLAALASRNGQHCSKSGGRRSTSPPSTPSVKAC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0524 193 Pfam AN1-like Zinc finger 102 141 IPR000058 GO:0008270
Glsi13g0524 193 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Glsi13g0524 193 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Glsi13g0524 193 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Glsi13g0524 193 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Glsi13g0524 193 MobiDBLite consensus disorder prediction 169 193 - -
Glsi13g0524 193 SUPERFAMILY AN1-like Zinc finger 5 57 IPR035896 -
Glsi13g0524 193 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Glsi13g0524 193 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 186 - -
Glsi13g0524 193 Gene3D - 2 67 IPR035896 -
Glsi13g0524 193 SUPERFAMILY AN1-like Zinc finger 94 141 IPR035896 -
Glsi13g0524 193 Gene3D - 77 157 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0524 Glsi-ChrGlsi13 23919918 23920586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0524 2 173 C2H2 Transcription Factor Family AT3G28210 62.209 2.31e-77 228