Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0515 ATGAAGAAAGGAAGCTTAGGTTCCAATCTCAAACTCACTCTTCCTGCATCTGATCAGGCTTCTTTTTCCAAGTTCCTGACTGAAAGTGGGACCTTCAAGGATGGGGATCTGCTTGTCAATAGAGACGGAGTTCGAATTGTTCCTCAGATTGAAGTTGAAGCTCCGCCCCCTATCAGGCCACTGGACAACCAGTTAAGTTTAGCAGACATAGACACAATCAAAGTTGTTGGGAAGGGAAGTGGCGGGATTGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGGTAATTCAAATGAATATTGAGGAATCTGTGCGCAGGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCTCAATGTCCATATGTAGTTGTCTGCTACCAGTCCTTCTATAATAATGGCGTCATATCAATTATCTTAGAGTACATGGATGGAGGGTCGTTAGCAGATCTTCTGAAGAAAGTGAAAACTATTCCAGAGGCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAGTGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAACCTTCTAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACCGACTTTGGTGTCAGTTCAATTATGGAAAGTACATCTGGTCAAGCCAACACTTTCATTGGAACATACAACTATATGTCTCCAGAGAGGATCAATGGCATCCAGTGTGGCTACAACTACAAAAGTGATATATGGAGTTTTGGACTAATATTGCTTGAGTGTGCTACTGGGCGGTTTCCATATACACCACCAGATCAAGGAGAAAGATGGGAAAGTGTTTTTGAACTTATTGAAGCTGTTGTCGAAAATCCTCCTCCCTCTGCTCCATCAGATCAGTTTTCTCCAGAGTTCTGCTCATTTATATCAGCATGTTTACAGAAAGACCCAAAGGCTAGATTGTCAGCTCAAGAACTTATGGGTCATCCATTTATCAACATGTATGAGGATTTGGATGTGGACCTATCATCTTACTTCTCCAATCAAGGATCTCCACTTGCTACACTATAA 1071 0.4108 MKKGSLGSNLKLTLPASDQASFSKFLTESGTFKDGDLLVNRDGVRIVPQIEVEAPPPIRPLDNQLSLADIDTIKVVGKGSGGIVQLVQHKWTNQFFALKVIQMNIEESVRRQIAQELKINQSAQCPYVVVCYQSFYNNGVISIILEYMDGGSLADLLKKVKTIPEAYLAAICKQVLKGLVYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSSIMESTSGQANTFIGTYNYMSPERINGIQCGYNYKSDIWSFGLILLECATGRFPYTPPDQGERWESVFELIEAVVENPPPSAPSDQFSPEFCSFISACLQKDPKARLSAQELMGHPFINMYEDLDVDLSSYFSNQGSPLATL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0515 356 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Glsi13g0515 356 CDD PKc_MAPKK_plant_like 68 336 - -
Glsi13g0515 356 Gene3D Phosphorylase Kinase; domain 1 57 149 - -
Glsi13g0515 356 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0515 356 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Glsi13g0515 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 16 348 - -
Glsi13g0515 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0515 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g0515 356 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Glsi13g0515 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Glsi13g0515 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Glsi13g0515 356 SUPERFAMILY Protein kinase-like (PK-like) 67 338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0515 Glsi-ChrGlsi13 23841137 23844937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0515 1 327 MAP Kinase Kinase Gene Family AT4G29810 68.155 2.94e-176 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Glsi13g0515 Pkinase 1.5e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0515 13 23841137 23844937 Glsi13g0515 13 23841137 23844937 ECH