Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0512 ATGGTTTGGTTTCAATGCGAGGATTGTGGGGACAATCTGAAGAAGCCCAAGTTGCCGAATCACTTCAGAACTTGTTCCGCTTCAAAGTTGTCTTGCATTGATTGTGGACAAATATTTGGGCAAGACAATGTTCAGGACCATACACAGTGTATGACGGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGAAAAACTTTGAATGGTACAACTGCCAAGCCTAACAAGGATAACAAGCAAAAACCAGAAGTTGATATTAATGTGGGGTTATCAGAACGGCCTCCTTGGTTTTGTAGTCTTTGCAACACAAAAACTACAAGTAAGCAAACACTTCTTCTCCATGCTGATGGAAAGAAACATAGGGCAAAAGCCCGAGCATTCCATGCTGCCAAGCAACAACCAACCCAAACAGACACATCTGTTCCTGATGCAAAGCTTCCAGTGGAGCATGGTTCTAATGATGAAGTGCGAGACAACACAACTGTAGAGCAGCCAAAATTGCAAGATCCATTTAAAAACAATAACTTGAAATCTGCAAATGAAATTTCTCCATCAAATAAAAAGAGAAAACCTGATGCATTGGAGGATTATCCTATGAGGAAAAAGGGCAAGGATGACAATTCAGGTGAGATGGCAAATGGGGAAGTAATTCAGGGGGAGAGAGCGGAGGCAGCAGAAAAAGATAGTCATTTGAAGAAAGAAAGGATAGCTGAATCTCGCCTTACAAGTGAGACCAAAAAGAAAATAAAGTGGAAGAAGTATATCAAATCAGCATTGAAATGTATTGTTATTTATGCACTTACATGTGATTATCTTTTGCTGAGACAGCATCCTGATGGAATCTTGAAGATGAAGAAATTGAGAAAACTTGTACTCAAAGATTTGCAGGAATCTGGCATTGTATTGGGTGAAACTGAACTGAATGAGGCACTTCAGCAGAAGATCAATTCAAGTTCCAGATTTGCAGTTGAGAAAAAGTATGTGCGTTTGGTGGCCAAGGACTGTAAGGAATTGCAATTCCGAAACATAGTTATAGGCATGCTCAGAAGTACTGAAAGATGTTCTTGGCTTAAATTTTCATTTGTCATCTTCGACATTGGTTTAGATATTTCCTTACACAGGATATTTGATAGTTGTACTGATGCAATAGCACAATTTTGGGATATTATTAATCATGAGATTTCTTTCGTATACACCAGTTCACAAAATTAA 1209 0.3896 MVWFQCEDCGDNLKKPKLPNHFRTCSASKLSCIDCGQIFGQDNVQDHTQCMTEAEKYGPKGQGKTLNGTTAKPNKDNKQKPEVDINVGLSERPPWFCSLCNTKTTSKQTLLLHADGKKHRAKARAFHAAKQQPTQTDTSVPDAKLPVEHGSNDEVRDNTTVEQPKLQDPFKNNNLKSANEISPSNKKRKPDALEDYPMRKKGKDDNSGEMANGEVIQGERAEAAEKDSHLKKERIAESRLTSETKKKIKWKKYIKSALKCIVIYALTCDYLLLRQHPDGILKMKKLRKLVLKDLQESGIVLGETELNEALQQKINSSSRFAVEKKYVRLVAKDCKELQFRNIVIGMLRSTERCSWLKFSFVIFDIGLDISLHRIFDSCTDAIAQFWDIINHEISFVYTSSQN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0512 402 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Glsi13g0512 402 SUPERFAMILY beta-beta-alpha zinc fingers 83 129 IPR036236 -
Glsi13g0512 402 MobiDBLite consensus disorder prediction 162 181 - -
Glsi13g0512 402 MobiDBLite consensus disorder prediction 182 208 - -
Glsi13g0512 402 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Glsi13g0512 402 Pfam Zinc-finger of C2H2 type 95 119 - -
Glsi13g0512 402 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 330 IPR039999 GO:0003677
Glsi13g0512 402 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Glsi13g0512 402 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Glsi13g0512 402 MobiDBLite consensus disorder prediction 56 81 - -
Glsi13g0512 402 MobiDBLite consensus disorder prediction 121 212 - -
Glsi13g0512 402 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Glsi13g0512 402 Gene3D Classic Zinc Finger 89 133 - -
Glsi13g0512 402 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Glsi13g0512 402 FunFam UBP1-associated proteins 1C 89 132 - -
Glsi13g0512 402 Gene3D - 1 50 - -
Glsi13g0512 402 MobiDBLite consensus disorder prediction 147 161 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0512 79 144 C2H2 Transcription Factor Family AT2G19380 54.545 1.38e-15 76.6