Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0479 ATGGCGTCATCTCTTATCTCAAATCCAGTATTGAACATTGATCGCTCGCGCGAAGCCTCCAAGAGGAAGAAGAAGAAGAAAGCTCAGCTCAAGCAACAGCTAGAAGATCAGAACAACAACATCACATGGAAATCCGATACCCAGCAACAAATCTACTCCTCCAAGCTCCACCGAGCCTTGTCTACAGTCAACCTTGGCTCTTCCAGCTCCGCCGCCGCCAACGACGCGCCTCGCCGTGGGAAAGCCGTACGCGAAGCCGCCGATAGGGTCCTGGCCGTCACAGCAAAGGGGAGGACTCGGTGGAGCCGAGCGATTCTGACCAACCGGCTCAAGCTCAAGTTCAGGAATCACAAGAGGCAGAGGATAACAGCCACCGGCAGCACCCGGTCGAGGAAGCCCCGAGTGAGCGTTTATCGGCTGAAGGGAAAGAATTTACCGGCTGTGCAGAAAAAAGTAAGGTTTCTTGGCCGGTTGGTCCCTGGTTGCCGGAAACAACCGTTGCCGGTGATTCTAGAGGAAACCATTGATTACATATCGGCGCTTCAGATGCAGGTCCGAGCCATGAGCGCTCTCGCTGACCAACTCTCTGACGCCGGCTCCAGCCCCAGCTCCGCGCCAACTAGCTAA 627 0.555 MASSLISNPVLNIDRSREASKRKKKKKAQLKQQLEDQNNNITWKSDTQQQIYSSKLHRALSTVNLGSSSSAAANDAPRRGKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFRNHKRQRITATGSTRSRKPRVSVYRLKGKNLPAVQKKVRFLGRLVPGCRKQPLPVILEETIDYISALQMQVRAMSALADQLSDAGSSPSSAPTS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0479 208 Coils Coil 13 40 - -
Glsi13g0479 208 CDD bHLH_AtIBH1_like 139 192 IPR044549 GO:0006355
Glsi13g0479 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 45 195 IPR044660 GO:0006355
Glsi13g0479 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 196 IPR036638 GO:0046983
Glsi13g0479 208 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0479 Glsi-ChrGlsi13 23436091 23436717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0479 43 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 57.325 1.04e-54 172