Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0475 ATGGAGGTGGAGATTTGTAGGACTTCCCAGAAGACAAGTTTGAAACCTGGGAGGGTTCCGGTTTTGGGGTTAGGGTTTGGGTTTCTGAGATGTGGGATGCTTCAGGCATTGATGAATCTGCTCTCTCTGTGTTTGAAGCCATTCGGGCGTGGTGCTGAGAATTACGATTCTATTGGAGCTATTGGGAACAGTTTCGGTGGTGGGGCAGGCGGAAGAGAAGGTAGAGACGGCTTACTATGGTTCCGCGATATCGGAAAGCATGGCTCTGGCGATTTTTCGATGGCGGTCGTGCAGGCAAACCAAGTTCTTGAAGACCAGAGCCAGATCGAGTCTGGTCCCTTGGGCACCTTCGTGGGTGTATACGATGGTCATGGAGGACCCGAGGCATCTCGATATGTTTGCGATCACTTGTTTCGGCACTTTCAAGCAGTATCAGCTCAGTCACAGGGAGTTGTGACTGCTGAGACCATTCAAAGAGCATTTCTCCAAACAGAAGAGGGGTTCACTGCTCTTGTGTCAGAATTATGGAGTACACGACCTCATGTTGCAACTGCTGGGACATGTTGTCTAGTTGGAGTGATATTTCAGCAGACCCTCTTTGTTGCAAACGTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCACCACTGGAGGTATTGCTGCAATTCAACTATCTACAGAACACAATGCAAATCTTGAGGCCATTAGACAGGAACTTAAGGAATTGCACCCAAATGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATTCACAGTTTAACCGGGAGCCAATTAATTCAAAATTCAGACTTCCTGAGCCAATGAACATGCCTATCTTGACTGCCAATCCATCTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCAGTGGACATTGTCCACAGCAATCCACGTGCGGGGAGTGCCAAAAGACTTGTTAAGGCTGCCCTCCATGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTCCGTAAGATTGACAAGAAGGTTCGACGTCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAGAGGCACGGTCTTAGATCCCCCACTTTCAATTCGAAGCGCTCTTGATCACTGA 1248 0.4567 MEVEICRTSQKTSLKPGRVPVLGLGFGFLRCGMLQALMNLLSLCLKPFGRGAENYDSIGAIGNSFGGGAGGREGRDGLLWFRDIGKHGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPEASRYVCDHLFRHFQAVSAQSQGVVTAETIQRAFLQTEEGFTALVSELWSTRPHVATAGTCCLVGVIFQQTLFVANVGDSRVVLGKKVGTTGGIAAIQLSTEHNANLEAIRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHSQFNREPINSKFRLPEPMNMPILTANPSILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVHSNPRAGSAKRLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVLDPPLSIRSALDH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0475 415 ProSiteProfiles PPM-type phosphatase domain profile. 91 392 IPR001932 -
Glsi13g0475 415 Pfam Protein phosphatase 2C 115 362 IPR001932 -
Glsi13g0475 415 PANTHER PROTEIN PHOSPHATASE 89 390 IPR015655 GO:0004722|GO:0006470
Glsi13g0475 415 FunFam Probable protein phosphatase 2C 42 82 400 - -
Glsi13g0475 415 ProSitePatterns PPM-type phosphatase domain signature. 117 125 IPR000222 GO:0043169
Glsi13g0475 415 SMART PP2C_4 81 390 IPR001932 -
Glsi13g0475 415 SUPERFAMILY PP2C-like 101 393 IPR036457 -
Glsi13g0475 415 Gene3D - 82 400 IPR036457 -
Glsi13g0475 415 CDD PP2Cc 92 392 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0475 Glsi-ChrGlsi13 23402411 23406916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0475 33 412 PP2C-type Phosphatase Gene Family AT4G38520 58.612 1.63e-161 458