Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0472 ATGTTCTTGTTCTGCTTAACGTATCCTACACTTGGCTTGGTTAAAGAAAAAGTTATAGACTCTCCTTTGTTAACAGAAAAGCTAAAAATGGTTACCAATCGCACTATCAAGGTTGATATTGATGGCGATGGGGAATTTAGATCTGTCCAAGCTGCCATAGATTCTATCCCTGAAGGAAATTCTAGGTGGATTATCGTTCATGTTAGGAAAGGAATTTACAGAGAAAAGAATGAGGCCCCCACAGGAGTTGCTTATACTTCGCAGAACCAATCAGTGGCTGCATTTGTAGCTGCAGATGAGGTGGCATTTTATCACTGTGCATTTTATAGCACTCATAACACCCTTTTTGATTACAAAGGCAGACATTACTATGATTCTTGCTACGTTCAAGGTTCTATAGATTTCATCTTTGGTCGAGGAAGATCCCTTTTCCATAAGACAGAGATATTTGTGATAGATGACAAAAGGGTATCAGTTCATGGGTCAGTCACAGCTCAACACAGGGAAAGTGCTAATGATAGAAGTGGATTTGTGTTTAACAAAGGAAAGGTCTATGGCATTGGTGGAGTGTACCTAGGAAGGGCCAAAGGTGCCTATTCTAGGGTCATCTTTGCAAAAACATACCTTTCTATGACCATTGTCCCAGAGGGTTGGACCAATTGGAGCTATGATGGTAGCACACAAAACCTATACCATGCGGAGTACAAGTGCTTTGGACCAGGAGCTGATACAAGTAGGCGTGTTTCTTGGGCAAAGCAGCTTAGTGACAAAGAAGCTGCTTCTTTTTTGTCTATTGATTTCATTGATGGCCAGGAATGGCTACCGGTGTGGCTATAA 837 0.4146 MFLFCLTYPTLGLVKEKVIDSPLLTEKLKMVTNRTIKVDIDGDGEFRSVQAAIDSIPEGNSRWIIVHVRKGIYREKNEAPTGVAYTSQNQSVAAFVAADEVAFYHCAFYSTHNTLFDYKGRHYYDSCYVQGSIDFIFGRGRSLFHKTEIFVIDDKRVSVHGSVTAQHRESANDRSGFVFNKGKVYGIGGVYLGRAKGAYSRVIFAKTYLSMTIVPEGWTNWSYDGSTQNLYHAEYKCFGPGADTSRRVSWAKQLSDKEAASFLSIDFIDGQEWLPVWL 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0472 278 Gene3D - 15 81 IPR012334 -
Glsi13g0472 278 Gene3D - 82 277 IPR012334 -
Glsi13g0472 278 Pfam Pectinesterase 85 270 IPR000070 GO:0030599|GO:0042545
Glsi13g0472 278 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 80 - -
Glsi13g0472 278 SUPERFAMILY Pectin lyase-like 31 276 IPR011050 -
Glsi13g0472 278 ProSitePatterns Pectinesterase signature 2. 129 138 IPR033131 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi13g0472 Glsi-ChrGlsi13 23367947 23370667 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0472 20 274 Carbohydrate Esterase AT1G05310 31.529 2.86e-51 171