Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0458 ATGGTGGAAGGCATAGAGAGCAAGGTGATTCTTGTAAGAGAATTTGATGAAGAAAGAGATATTAAATTGGTGAGGAAGCTAGAGAGGAACCGCGAGAATATTGGGACTAAAAAGAGGGTCTCCATTTTCACCAACATGATGATGGATGACCCTTTATCTAGGATTAGATTCTACCCACTTCATGTTATGTTGGTTGCTGAGCTGCTTGAAAATGGGGAGCTTGTGGGAGTGGTGAGGGGATGCATCAAGAGTGTGGGCACTCATTCTGGATCAATCTTGAAGATGGGTTGTATACTAGGCTTTAGGGTCTCTCCTACTTACCGGAGAAAGGGGGTTGGGCTAAAACTTATAAGCTCAGTTGAGGAATGGATGGTGAGAAATGGAGCTGAGTACACATTGCTAGCCACTGAGAAGAAAAATGAAGCCTCGAGAAACCTATTCACAATCAAATGCAAATACTTGAACCTGAGCTCACTAGCCATTTTTGTCCACCCCATTAGGTTCCCTGCGAAGCACATCTCAAGGGACATAAAAATAGAGAAGTTGAACATAGACCAAGCAATTTCCTTGTACAAAAGAATCCTAAAGGCCAAAGAGTTGTTCCCTATAGACATGGATGCTATTTTGAAGGAGAAGCTCAGCCTAGGCACATGGGTTTTTAGCTACAAAGATGAAACTCCAAGTTCTTGGATCATCTTTAGCTTATGGGATACTTGTGAAACTTCTTATAAGCTTCAACTTAGAAAGCCTCATCGTCTTCTTGGGTTTCTTAATGCTGCTCTAAATCAAGCAAGAGAGAAAATTTTGCCTTGTCTTAGAATGTCAGTACCTTTTGGGTTTATCTTCATATATGGACTCCATGGAGAGGGAGAGAACCTTGGGGAGCTCATGGAATCCATATGGAGGTTCACTTCAAGATTGGGAGAGAGAATGAAGGGCTGCAAAATGATTATAACTGAGTTAGGGTTGGCTGATCCTCTTGCAAATCTTGTTCCTCAAACTGCCTCTCGTATTGATGACCTTTGGTTTATAAAAAGACTTTCGGGCCAGAGTGATGAAAAAGACGTACTTCTGATGAAGAGAGAAATGGGGAATGTGTTTGTTGACCCTAGAGATTTTTAA 1122 0.4162 MVEGIESKVILVREFDEERDIKLVRKLERNRENIGTKKRVSIFTNMMMDDPLSRIRFYPLHVMLVAELLENGELVGVVRGCIKSVGTHSGSILKMGCILGFRVSPTYRRKGVGLKLISSVEEWMVRNGAEYTLLATEKKNEASRNLFTIKCKYLNLSSLAIFVHPIRFPAKHISRDIKIEKLNIDQAISLYKRILKAKELFPIDMDAILKEKLSLGTWVFSYKDETPSSWIIFSLWDTCETSYKLQLRKPHRLLGFLNAALNQAREKILPCLRMSVPFGFIFIYGLHGEGENLGELMESIWRFTSRLGERMKGCKMIITELGLADPLANLVPQTASRIDDLWFIKRLSGQSDEKDVLLMKREMGNVFVDPRDF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0458 373 Pfam Acetyltransferase (GNAT) family 64 151 IPR000182 GO:0016747
Glsi13g0458 373 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 147 IPR016181 -
Glsi13g0458 373 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 215 IPR000182 GO:0016747
Glsi13g0458 373 CDD NAT_SF 63 131 - -
Glsi13g0458 373 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 373 - -
Glsi13g0458 373 Gene3D - 14 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0458 Glsi-ChrGlsi13 23246816 23248936 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi13g0458 Acetyltransf_1 2.5e-13 CL0257