Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0457 ATGGCGTTCTGGTGGACCTTGCTCGTTATAGCCTTCGCTTACGCCATTTGTAGGTTCCTTCTCATGCTCATTCCTCCCAAAGTTCCTTCTATCGACGTTGACGCCTCCGATGTGTTGGATGATGGAAATCAAGCGCAGGAGAACAGCTTCATATATGTACCTCCGAGGGGACAGGCGCAGCAATCAGGCAAGAAAGTTCAATGCTATGAACCTGCAACGATGAAATATTTAGGATATGTTCCTGCATTGACATCTATTGAGGTCAAGGAGCAGGTGGCCAAAGTGAGGAAGGCACAGAAAATGTGGGCAAAAACCAGCTTCAAGCAAAGACGCCAGTTTTTGCGTATACTTTTACAGTATATAATCAGACATCAAGAACTTATATGCGAAATATCTTCACGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTACTGTCAGAGGGTGAGCAATGGCTAAAGCCTGAATACCGATCTTCTGGAAGAGCAATGCTTCATAAAAGAGCCAGAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCTATTGTTTCATGGAACTATCCTTTCCACAATATTTTTAATCCTATGCTGGCGGCGGTCTTTTCTGGAAATGGCATTGTGATTAAGATCTCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGATCTTGTTGAGGTGATAACAGGGTTTGGTGAAAGTGGAGAAGCATTGGTGTCTTCTGTTGATAAAGTCATATTTGTGGGATCACCTGGTGTTGGTAAGACGATAATGAGAAATGCTGCTGAGACACTTATACCAGTTACGCTAGAGCTTGGCGGAAAAGATGCATTTATAGTGTGTGAAGATGTAGATGTGGACCATGTTGCACAAATTGCAGTCAGAGCTGTCCTTCAGTCAAGCGGACAGAATTGTGCTGGGGCTGAGCGATTTTATGTCCACCGGGACATTTATTCATCTTTTGTCAGTAAAGTTACCAAAATCATAAAATCCGTTACATCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGACAGCCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAAATTTTGGCCATATAGGTGAAGATGCAGTCGATCAATTTTTCCCCCCTACTGTGATTGTAAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCTATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGCTATCAAGCTTGCAAATGATTCAAAATATGGGCTTGGATGTGCTGTTTTCTCAGGGAGTCAGACCCGTGCCAGAGAGATTGCTTCGCAGATACATTGTGGAGTTGCTGCAGTTAATGATTTTGCAGCAACATACATGTGTCAGTCCCTGCCATTTGGGGGTGTGAAACATAGTGGATTTGGACGATTTGCTGGTCCGGAAGGATTGCGAGCCTGCTGTCTTGTAAAATCAGTTGTGGAGGATCGATGGTGGCCATTTATTAAAATCAAGATACCTAAGCCTATCCAGTATCCCGTTGCAGATAATGGATTTGAATTTCTGGAGTCACTTGTTGAAGCACTTTATGGGCTCAACATCTGGGACCGATTGCGAGCATTGGTGAATGTTCTAAAAATGCTTACTGAGCAAAACTCCCTCAGTAGCAGTAAGAGAACAAAGGACTGA 1791 0.4322 MAFWWTLLVIAFAYAICRFLLMLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGQAQQSGKKVQCYEPATMKYLGYVPALTSIEVKEQVAKVRKAQKMWAKTSFKQRRQFLRILLQYIIRHQELICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRAMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGESGEALVSSVDKVIFVGSPGVGKTIMRNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRDIYSSFVSKVTKIIKSVTSGPPLAGKYDMGALCMHEHSEKLDSLVNDALDKGAEIVARGNFGHIGEDAVDQFFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEAIKLANDSKYGLGCAVFSGSQTRAREIASQIHCGVAAVNDFAATYMCQSLPFGGVKHSGFGRFAGPEGLRACCLVKSVVEDRWWPFIKIKIPKPIQYPVADNGFEFLESLVEALYGLNIWDRLRALVNVLKMLTEQNSLSSSKRTKD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0457 596 FunFam Aldehyde dehydrogenase 22A1 305 500 - -
Glsi13g0457 596 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Glsi13g0457 596 CDD ALDH_F15-22 69 531 - -
Glsi13g0457 596 FunFam aldehyde dehydrogenase 22A1 65 320 - -
Glsi13g0457 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Glsi13g0457 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Glsi13g0457 596 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 527 - -
Glsi13g0457 596 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Glsi13g0457 596 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Glsi13g0457 596 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0457 Glsi-ChrGlsi13 23203613 23209901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0457 1 593 Aldehyde Dehydrogenase Gene Family AT3G66658 80.438 0.0 1033