Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0421 ATGTCTAACCCATTTTCAAAACACCTTCACCTATGTTTCTTCAGATTCAAATGCGCTGCCTGCACCACCTCCACCACCACCCCCTTATCCCCACCCCCATCACCACCATCTCCTTCCTCTTCCGTTTCCACCAGCACCACCCCCACTTTCCTTTTCAACTCTGCCTTCTCTCTCTACAACCCTACCTCCTCCTCGAAATCCAACTACCATTTCTTCTCCTCCTCTTCCTCCTCTGACGAGTCCGACTCCTGCGACCCTCCTCCGCCTCCGGACTTCGCCTCCGTCTTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGCCACTCTAAGTCCATCATTCCGTCCCCCGACACTCACCCCGCCAACCCCAAGAACACCGCCCCAGCCACCTTCATACCCGATGGCTGCGGTGGCAGTGGCGGCGTCAGAGTGCCCAAATTCTCTCTCAACCCTTATGTAGATTTCCGGCATTCAATGCAGGAAATGATCGAATCCCGCGAATTCTTCGACGTGAAAAAAGATTGGGATTATCTCCACGAGCTTCTCTTGTGCTATCTTGCTCTTAATCCTACCCATACCCACAAGTTCATTGTTCGCGCCTTCACCGACCTCGTTCTTGACCTTTTATCATCATCGTCCTCCTCCTCGACATCATCATTATCAATGGAAAAAAATAGTCGTTGCCGGAACCTCCACCAGCGGCACAGAAGCTTCTCAGGACGGTAG 726 0.5289 MSNPFSKHLHLCFFRFKCAACTTSTTTPLSPPPSPPSPSSSVSTSTTPTFLFNSAFSLYNPTSSSKSNYHFFSSSSSSDESDSCDPPPPPDFASVFASQRFFFSSPGHSKSIIPSPDTHPANPKNTAPATFIPDGCGGSGGVRVPKFSLNPYVDFRHSMQEMIESREFFDVKKDWDYLHELLLCYLALNPTHTHKFIVRAFTDLVLDLLSSSSSSSTSSLSMEKNSRCRNLHQRHRSFSGR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0421 241 Pfam Transcriptional repressor, ovate 148 208 IPR006458 -
Glsi13g0421 241 MobiDBLite consensus disorder prediction 212 226 - -
Glsi13g0421 241 MobiDBLite consensus disorder prediction 107 132 - -
Glsi13g0421 241 NCBIfam uncharacterized plant-specific domain TIGR01568 145 209 IPR006458 -
Glsi13g0421 241 ProSiteProfiles OVATE domain profile. 144 207 IPR006458 -
Glsi13g0421 241 MobiDBLite consensus disorder prediction 212 241 - -
Glsi13g0421 241 MobiDBLite consensus disorder prediction 107 125 - -
Glsi13g0421 241 MobiDBLite consensus disorder prediction 26 45 - -
Glsi13g0421 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 211 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0421 Glsi-ChrGlsi13 22765717 22766442 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi13g0421 Ovate 1.2e-23 No_clan